RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 USP34Q70CQ2 3546 aa13.82□□□□□ -0.2
SEC61A1-206ENST00000491668 MYH15Q9Y2K3 1946 aa13.82□□□□□ -0.2
SEC61A1-206ENST00000491668 ANK1P16157 1881 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 WDR27A2RRH5 827 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 PPEF2O14830 753 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 OGTO15294 1046 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 CCL16O15467 120 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 TRAPPC3O43617 180 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 NARSO43776 548 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 TBCAO75347 108 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 ABLIM3O94929 683 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 HNRNPA1P09651 372 aaKnown RBP eCLIP13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 LAMP2P13473 410 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 SCP2P22307 547 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 LRPAP1P30533 357 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 HOXA9P31269 272 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 GBP2P32456 591 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 ROR1Q01973 937 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 KCNA1Q09470 495 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 TDGQ13569 410 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 RRAGBQ5VZM2 374 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 POTEHQ6S545 545 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 ZNF720Q7Z2F6 126 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 ST13P5Q8NFI4 369 aaPredicted RBP13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 DDX12PQ92771 950 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 FGFBP2Q9BYJ0 223 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 PIDD1Q9HB75 910 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 HCFC1R1Q9NWW0 138 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 CPSF3Q9UKF6 684 aaKnown RBP13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 STYXL1Q9Y6J8 313 aa13.81□□□□□ -0.2
SEC61A1-206ENST00000491668 MYO15AQ9UKN7 3530 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 ANHXE9PGG2 379 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 SYN3O14994 580 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 PRPF40AO75400 957 aaKnown RBP13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 SEC24AO95486 1093 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 CMA1P23946 247 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 AVPR2P30518 371 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 ADSSP30520 456 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 MATR3P43243 847 aaKnown RBP eCLIP13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 CASP5P51878 434 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 NHLH1Q02575 133 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 TCF15Q12870 199 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 PPM1LQ5SGD2 360 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 LIN9Q5TKA1 542 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 RESP18Q5W5W9 173 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 CRELD2Q6UXH1 353 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 CCDC73Q6ZRK6 1079 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 GET4Q7L5D6 327 aaPredicted RBP13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 SLC44A3Q8N4M1 653 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 PDILTQ8N807 584 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 FSIP1Q8NA03 581 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 ZNF461Q8TAF7 563 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 ITFG1Q8TB96 612 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 STAMQ92783 540 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 KIF12Q96FN5 646 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 MSTO1Q9BUK6 570 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 KCNH6Q9H252 994 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 FBXL5Q9UKA1 691 aa13.8□□□□□ -0.2
SEC61A1-206ENST00000491668 DMDP11532 3685 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 A0A1B0GVL5 298 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 A0A1W2PQ27 194 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 A0A1W2PQ64 194 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 A0A1W2PQD8 194 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 FRMD3A2A2Y4 597 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 M0QZQ0 153 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 NRG2O14511 850 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 SPTLC1O15269 473 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 VNN2O95498 520 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 NFICP08651 508 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 POU2F2P09086 479 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 NPR3P17342 541 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 CYP3A5P20815 502 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 FSHRP23945 695 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 STAT6P42226 847 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 AARSP49588 968 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 ACOT2P49753 483 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 HTR4Q13639 388 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 E2F4Q16254 413 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 UVSSAQ2YD98 709 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 JADE1Q6IE81 842 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 CLEC17AQ6ZS10 378 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 SUGP1Q8IWZ8 645 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 TMEM105Q8N8V8 129 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 ZSWIM2Q8NEG5 633 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 PYM1Q9BRP8 204 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 RPP25Q9BUL9 199 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 TBC1D7Q9P0N9 293 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 IGSF9Q9P2J2 1179 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 DNMT3BQ9UBC3 853 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 KCNH3Q9ULD8 1083 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 UBQLN1Q9UMX0 589 aaKnown RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 DUSP12Q9UNI6 340 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 NUB1Q9Y5A7 615 aa13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 ZFHX2Q9C0A1 2572 aaPredicted RBP13.79□□□□□ -0.2
SEC61A1-206ENST00000491668 ARHGEF37A1IGU5 675 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 PFKFB1P16118 471 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 MCM4P33991 863 aa13.78□□□□□ -0.2
SEC61A1-206ENST00000491668 WNT7BP56706 349 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms