RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 STRN3Q13033 797 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 GRM2Q14416 872 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CCDC142Q17RM4 750 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CTXN3Q4LDR2 81 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 PABPC1LQ4VXU2 614 aaKnown RBP9.72□□□□□ -0.85
HDAC3-211ENST00000491581 STXBP5Q5T5C0 1151 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 TANGO2Q6ICL3 276 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 DTWD2Q8NBA8 298 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 GLIS3Q8NEA6 775 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 HDAC7Q8WUI4 952 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 SPIRE2Q8WWL2 714 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 RAD54LQ92698 747 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 DDX12PQ92771 950 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 HPS3Q969F9 1004 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 KIF12Q96FN5 646 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 KCNH6Q9H252 994 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CYP4F11Q9HBI6 524 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CEP72Q9P209 647 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 IGSF9Q9P2J2 1179 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 FBXO2Q9UK22 296 aaPredicted RBP9.72□□□□□ -0.85
HDAC3-211ENST00000491581 CDH7Q9ULB5 785 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 TBX20Q9UMR3 447 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 NUB1Q9Y5A7 615 aa9.72□□□□□ -0.85
HDAC3-211ENST00000491581 OBSL1O75147 1896 aa9.71□□□□□ -0.85
HDAC3-211ENST00000491581 TTC26A0AVF1 554 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 CLDN3O15551 220 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 HCRTO43612 131 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 ABLIM3O94929 683 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 FAM13AO94988 1023 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 FCARP24071 287 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 UBA7P41226 1012 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 LIG4P49917 911 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 CLCN5P51795 746 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 ADCY1Q08828 1119 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 CUL4AQ13619 759 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 MRPL58Q14197 206 aaKnown RBP9.71□□□□□ -0.86
HDAC3-211ENST00000491581 ANGPT1Q15389 498 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 ZBTB6Q15916 424 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 FOXD4L6Q3SYB3 417 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-211ENST00000491581 JADE1Q6IE81 842 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 SLC8B1Q6J4K2 584 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 FOXD4L3Q6VB84 417 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-211ENST00000491581 SFR1Q86XK3 245 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 CCDC105Q8IYK2 499 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 RSPRY1Q96DX4 576 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 CHAMP1Q96JM3 812 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 SUSD3Q96L08 255 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 ARHGEF3Q9NR81 526 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 TOPORSQ9NS56 1045 aaPredicted RBP9.71□□□□□ -0.86
HDAC3-211ENST00000491581 DLGAP2Q9P1A6 1054 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 STK39Q9UEW8 545 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 SLC27A5Q9Y2P5 690 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 RBM19Q9Y4C8 960 aaKnown RBP9.71□□□□□ -0.86
HDAC3-211ENST00000491581 INSL5Q9Y5Q6 135 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 BACE2Q9Y5Z0 518 aa9.71□□□□□ -0.86
HDAC3-211ENST00000491581 VPS13AQ96RL7 3174 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 PRR23AA6NEV1 266 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 MYMKA6NI61 221 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 PRRG1O14668 218 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 HNRNPDLO14979 420 aaKnown RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 TRAK2O60296 914 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 EIF5BO60841 1220 aaKnown RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 KRT18P05783 430 aaKnown RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 HNRNPA1P09651 372 aaKnown RBP eCLIP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 MYL4P12829 197 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 SYT1P21579 422 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 VIPR2P41587 438 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 TWF1Q12792 350 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 PRSS36Q5K4E3 855 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 ARL6IP4Q66PJ3 421 aaKnown RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 TSSK4Q6SA08 328 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 CRELD2Q6UXH1 353 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 ANKS3Q6ZW76 656 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 MAML2Q8IZL2 1156 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 RASSF8Q8NHQ8 419 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 ZNF461Q8TAF7 563 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 TTC8Q8TAM2 541 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 UROC1Q96N76 676 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 USP28Q96RU2 1077 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 RHOBTB2Q9BYZ6 727 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 DNAJC25Q9H1X3 360 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 ZNF334Q9HCZ1 680 aaPredicted RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 HEBP1Q9NRV9 189 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 WNT16Q9UBV4 365 aa9.7□□□□□ -0.86
HDAC3-211ENST00000491581 MRPS23Q9Y3D9 190 aaKnown RBP9.7□□□□□ -0.86
HDAC3-211ENST00000491581 A0A0B4J269 797 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 GOLGA8IPA6NC78 632 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 GOLGA8JA6NMD2 632 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 CPB1P15086 417 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 ATF2P15336 505 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 CASP1P29466 404 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 ADSSP30520 456 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 ZNF131P52739 623 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 SMTNP53814 917 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 CREMQ03060 361 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 ELAVL2Q12926 359 aaKnown RBP9.69□□□□□ -0.86
HDAC3-211ENST00000491581 DUSP4Q13115 394 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 TEAD2Q15562 447 aa9.69□□□□□ -0.86
HDAC3-211ENST00000491581 FAM78AQ5JUQ0 283 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms