RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 FREM2Q5SZK8 3169 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 CHURC1-FNTBB4DL54 471 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 H7C4K7 107 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 PTGESO14684 152 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 HRO43593 1189 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 RECQL4O94761 1208 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 ABLIM3O94929 683 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 SLITRK3O94933 977 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 CHRNB1P11230 501 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 ATF2P15336 505 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 RPS6KB1P23443 525 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 FCARP24071 287 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 HOXA6P31267 233 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 FNTBP49356 437 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 SATB1Q01826 763 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 SF3A2Q15428 464 aaKnown RBP12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 NAB2Q15742 525 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 C8orf34Q49A92 452 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 FAM78AQ5JUQ0 283 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 TPGS2Q68CL5 300 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 SLC8B1Q6J4K2 584 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 YAF2Q8IY57 180 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 TCEAL8Q8IYN2 117 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 MCPH1Q8NEM0 835 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 HAS1Q92839 578 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 KCNB2Q92953 911 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 DDX27Q96GQ7 796 aaKnown RBP12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 ZNF512Q96ME7 567 aaPredicted RBP12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 BACH2Q9BYV9 841 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 POLR3FQ9H1D9 316 aaPredicted RBP12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 FZD8Q9H461 694 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 TRPV4Q9HBA0 871 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 CACNG4Q9UBN1 327 aa12.28□□□□□ -0.44
CLCNKA-206ENST00000491433 WDR27A2RRH5 827 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 GIPC1O14908 333 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 ZBTB39O15060 712 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 ZNF806P0C7X5 589 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 CPA1P15085 419 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 CCNE1P24864 410 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 ROR1Q01973 937 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 PRPF4BQ13523 1007 aaKnown RBP12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 MAPK6Q16659 721 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 DCAF4L1Q3SXM0 396 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 CDCA2Q69YH5 1023 aaPredicted RBP12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 VITQ6UXI7 678 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 WDR5BQ86VZ2 330 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 SYNPOQ8N3V7 929 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 FAM160A2Q8N612 972 aaPredicted RBP12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 EIF2AK1Q9BQI3 630 aaKnown RBP12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 CYP4F11Q9HBI6 524 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 NCOA5Q9HCD5 579 aaKnown RBP12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 PCDHA12Q9UN75 941 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 MSRB2Q9Y3D2 182 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 KALRNO60229 2985 aa12.27□□□□□ -0.45
CLCNKA-206ENST00000491433 PIEZO2Q9H5I5 2752 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 J3QKU1 62 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 SYN3O14994 580 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 CHADO15335 359 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 PRB1P04280 392 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 NTRK1P04629 796 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 TKTP29401 623 aaKnown RBP12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 RARRES1P49788 294 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 KPNA1P52294 538 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 HAUS6Q7Z4H7 955 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 ZNF274Q96GC6 653 aaPredicted RBP12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 HSD17B14Q9BPX1 270 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 PDZD7Q9H5P4 517 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 ASAH2Q9NR71 780 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 SLC38A7Q9NVC3 462 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 PCDHGA5Q9Y5G8 931 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 INSL5Q9Y5Q6 135 aa12.26□□□□□ -0.45
CLCNKA-206ENST00000491433 ANKRD17O75179 2603 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 SPAG17Q6Q759 2223 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 K7ESF4 209 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 TK2O00142 265 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 ACKR2O00590 384 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 USO1O60763 962 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 CDC45O75419 566 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 CDKL5O76039 1030 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 CLCNKBP51801 687 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 YARSP54577 528 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 PPP2R5AQ15172 486 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 NPY5RQ15761 445 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 UPP1Q16831 310 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 RNF43Q68DV7 783 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 CACNA2D4Q7Z3S7 1137 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 RALGPS2Q86X27 583 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 POTEDQ86YR6 584 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 NOSTRINQ8IVI9 506 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 ZSCAN18Q8TBC5 510 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 LRIG1Q96JA1 1093 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 PPP1R10Q96QC0 940 aaKnown RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 MKNK1Q9BUB5 465 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 TOPORSQ9NS56 1045 aaPredicted RBP12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 SNX14Q9Y5W7 946 aa12.25□□□□□ -0.45
CLCNKA-206ENST00000491433 MYO9AB2RTY4 2548 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 AKAP3O75969 853 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 EPN2O95208 641 aa12.24□□□□□ -0.45
CLCNKA-206ENST00000491433 PRKCBP05771 671 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms