RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 RABGGTAQ92696 567 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 LPPQ93052 612 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 IMPG2Q9BZV3 1241 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 THAP2Q9H0W7 228 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 OSGEPQ9NPF4 335 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 AGAP1Q9UPQ3 857 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 RPS6KA5O75582 802 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 CD52P31358 61 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 NOP2P46087 812 aaKnown RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 FMO1Q01740 532 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 GCNT1Q02742 428 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 BMS1Q14692 1282 aaKnown RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 TMEM132DQ14C87 1099 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 LLGL2Q6P1M3 1020 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 VPS36Q86VN1 386 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 PCSK9Q8NBP7 692 aaKnown RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 RNF169Q8NCN4 708 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 ARHGEF26Q96DR7 871 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 ZFP42Q96MM3 310 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 BEGAINQ9BUH8 593 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 CCDC94Q9BW85 323 aaPredicted RBP14.94□□□□□ -0.02
SMPD4-219ENST00000491128 HYOU1Q9Y4L1 999 aa14.94□□□□□ -0.02
SMPD4-219ENST00000491128 M0QZ92 97 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 FTCDO95954 541 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 RFX1P22670 979 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 CXCR5P32302 372 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 GLT1D1Q96MS3 346 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 CTAGE9A4FU28 777 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 ZNF185O15231 689 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 GRM5P41594 1212 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 PDE6CP51160 858 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 DEFB118Q96PH6 123 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 SMYD3Q9H7B4 428 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 IPPQ9Y573 584 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 SCN10AQ9Y5Y9 1956 aa14.93□□□□□ -0.02
SMPD4-219ENST00000491128 A0A1W2PQ45 241 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 A0A1W2PQY0 241 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 PALMO75781 387 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 IL18RAPO95256 599 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 FTLP02792 175 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 NME8Q8N427 588 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 RBBP8NLQ8NC74 664 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 SMG8Q8ND04 991 aaKnown RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 SLAIN1Q8ND83 568 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 CXorf38Q8TB03 319 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 DDX1Q92499 740 aaKnown RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 CAPZA3Q96KX2 299 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 CARD6Q9BX69 1037 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 SENP6Q9GZR1 1112 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 SDCBP2Q9H190 292 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 CISHQ9NSE2 258 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 DPP3Q9NY33 737 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 MYO1AQ9UBC5 1043 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 HMGXB4Q9UGU5 601 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 TRPV2Q9Y5S1 764 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 LAMA3Q16787 3333 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 CST5P28325 142 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 ASPAP45381 313 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 CDC42EP1Q00587 391 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 SGSM1Q2NKQ1 1148 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 ZNF618Q5T7W0 954 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 DPH6Q7L8W6 267 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 MYRIPQ8NFW9 859 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 MMS19Q96T76 1030 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 NAPGQ99747 312 aaPredicted RBP14.92□□□□□ -0.02
SMPD4-219ENST00000491128 STARD7Q9NQZ5 370 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 NENFQ9UMX5 172 aa14.92□□□□□ -0.02
SMPD4-219ENST00000491128 THSD7BQ9C0I4 1608 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 ZC3H11AO75152 810 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMPD4-219ENST00000491128 H2AFZP0C0S5 128 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 CCDC172P0C7W6 258 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 SURF1Q15526 300 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 H2AFVQ71UI9 128 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 SNX27Q96L92 541 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.91□□□□□ -0.02
SMPD4-219ENST00000491128 EPC1Q9H2F5 836 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 SMARCAL1Q9NZC9 954 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 PJA2O43164 708 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 MGEA5O60502 916 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 BRD2P25440 801 aaKnown RBP14.91□□□□□ -0.02
SMPD4-219ENST00000491128 ATN1P54259 1190 aaPredicted RBP14.91□□□□□ -0.02
SMPD4-219ENST00000491128 YARSP54577 528 aaKnown RBP14.91□□□□□ -0.02
SMPD4-219ENST00000491128 NKX3-2P78367 333 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 ENPEPQ07075 957 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 DCAF4L1Q3SXM0 396 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 RSPH3Q86UC2 560 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 CYFIP2Q96F07 1278 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 HPDLQ96IR7 371 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 ZSWIM1Q9BR11 485 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 TSGA10Q9BZW7 698 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 NIF3L1Q9GZT8 377 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 PDCL3Q9H2J4 239 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 ASB7Q9H672 318 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 PADI3Q9ULW8 664 aa14.91□□□□□ -0.02
SMPD4-219ENST00000491128 HCRTO43612 131 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 GNA15P30679 374 aa14.9□□□□□ -0.02
SMPD4-219ENST00000491128 SOX4Q06945 474 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-219ENST00000491128 KCTD19Q17RG1 926 aaPredicted RBP14.9□□□□□ -0.02
SMPD4-219ENST00000491128 TWNKQ96RR1 684 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms