RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 FAM160A2Q8N612 972 aaPredicted RBP16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 UROC1Q96N76 676 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 RXFP3Q9NSD7 469 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 PDRG1Q9NUG6 133 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 FBXL5Q9UKA1 691 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ANGPTL2Q9UKU9 493 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 BAHCC1Q9P281 2608 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 WDFY3Q8IZQ1 3526 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 ATRXP46100 2492 aa16.84■□□□□ 0.29
SCAMP3-208ENST00000490999 SMIM28A0A1B0GU29 152 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 ZNF197O14709 1029 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 REC8O95072 547 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 CTDNEP1O95476 244 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 PTGDRQ13258 359 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 STXBP5Q5T5C0 1151 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 IL31Q6EBC2 164 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 PADI6Q6TGC4 694 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 MAMSTRQ6ZN01 415 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 CEP68Q76N32 757 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 CENPQQ7L2Z9 268 aaPredicted RBP16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 LONP2Q86WA8 852 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 CATSPER3Q86XQ3 398 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 TMEM130Q8N3G9 435 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 DEPDC1BQ8WUY9 529 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 TMEM60Q9H2L4 133 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 ASAH2Q9NR71 780 aa16.83■□□□□ 0.28
SCAMP3-208ENST00000490999 PMLP29590 882 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 NAMPTP43490 491 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 CTXN3Q4LDR2 81 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 N4BP2L1Q5TBK1 243 aaPredicted RBP16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 IQCEQ6IPM2 695 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 ELMOD1Q8N336 334 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 SPEM1Q8N4L4 309 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 SHKBP1Q8TBC3 707 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 CSGALNACT1Q8TDX6 532 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 C18orf25Q96B23 403 aaPredicted RBP16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 ZFYVE19Q96K21 471 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 ZMAT2Q96NC0 199 aaKnown RBP16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 MTMR9Q96QG7 549 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 CDT1Q9H211 546 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 SMOC1Q9H4F8 434 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 TRPV5Q9NQA5 729 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 ORC3Q9UBD5 711 aaPredicted RBP16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 TPCN1Q9ULQ1 816 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 IGF2RP11717 2491 aa16.82■□□□□ 0.28
SCAMP3-208ENST00000490999 ARHGEF35A5YM69 484 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 MICAL2O94851 1124 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 CPB1P15086 417 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 PXNP49023 591 aaPredicted RBP16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 KPNA1P52294 538 aaPredicted RBP16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 LRRC32Q14392 662 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 BRMS1Q9HCU9 246 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 YIPF1Q9Y548 306 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 NUB1Q9Y5A7 615 aa16.81■□□□□ 0.28
SCAMP3-208ENST00000490999 FAM208BQ5VWN6 2430 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 LAMA1P25391 3075 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 A0A1W2PRU2 124 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 BTBD18B2RXH4 712 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 SYN3O14994 580 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 AXIN1O15169 862 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 HARSP12081 509 aaKnown RBP16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 FDPSP14324 419 aaKnown RBP16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 CYP11B2P19099 503 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 YARSP54577 528 aaKnown RBP16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 ZNF568Q3ZCX4 644 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 ZNF280DQ6N043 979 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 RNF19BQ6ZMZ0 732 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 MFSD6LQ8IWD5 586 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 YAF2Q8IY57 180 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 ZNF512Q96ME7 567 aaPredicted RBP16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 PGLYRP2Q96PD5 576 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 ARRDC1-AS1Q9H2J1 176 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 TUFT1Q9NNX1 390 aa16.8■□□□□ 0.28
SCAMP3-208ENST00000490999 SPECC1L-ADORA2AF8WAN1 911 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 H7C4K7 107 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 MEFVO15553 781 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 PFKFB2O60825 505 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 OR4Q2P0C623 313 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 XRCC6P12956 609 aaKnown RBP eCLIP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 CTHP32929 405 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 MCM4P33991 863 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 MCM7P33993 719 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 GRM5P41594 1212 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 PON2Q15165 354 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 DIS3L2Q8IYB7 885 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 C12orf50Q8NA57 414 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 NACC1Q96RE7 527 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 CCDC94Q9BW85 323 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 TRPV4Q9HBA0 871 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 TOPORSQ9NS56 1045 aaPredicted RBP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 GTSE1Q9NYZ3 720 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 TUBGCP4Q9UGJ1 667 aa16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
SCAMP3-208ENST00000490999 EXTL3O43909 919 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 PAPSS2O95340 614 aaPredicted RBP16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 VNN2O95498 520 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 CNR2P34972 360 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 EPHA5P54756 1037 aa16.78■□□□□ 0.28
SCAMP3-208ENST00000490999 MRPL58Q14197 206 aaKnown RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms