RNA–Protein interactions for RNA: ENST00000490796.1

SREBF1-216, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 698 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-216ENST00000490796 TUBGCP4Q9UGJ1 667 aa21.49■■□□□ 1.03
SREBF1-216ENST00000490796 K7ENM7 598 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 ZNF197O14709 1029 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 TBCAO75347 108 aaKnown RBP21.48■■□□□ 1.03
SREBF1-216ENST00000490796 SPAG1Q07617 926 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 ARSHQ5FYA8 562 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 CYP4A22Q5TCH4 519 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 IQCEQ6IPM2 695 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 TCEAL8Q8IYN2 117 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 KCNG4Q8TDN1 519 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 DDX12PQ92771 950 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 REEP2Q9BRK0 252 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 PARVGQ9HBI0 331 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 UBQLN1Q9UMX0 589 aaKnown RBP21.48■■□□□ 1.03
SREBF1-216ENST00000490796 PCDHB8Q9UN66 801 aa21.48■■□□□ 1.03
SREBF1-216ENST00000490796 LONP1P36776 959 aaKnown RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 STARD6P59095 220 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 PRKCQQ04759 706 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 MRPL58Q14197 206 aaKnown RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 MLF2Q15773 248 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 SLC44A4Q53GD3 710 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 PDZD4Q76G19 769 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 USP37Q86T82 979 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 PJA1Q8NG27 643 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 FAM212AQ96EL1 285 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 ZNF512Q96ME7 567 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 FOXQ1Q9C009 403 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 RPF1Q9H9Y2 349 aaKnown RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 AVENQ9NQS1 362 aaPredicted RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 AFF4Q9UHB7 1163 aaKnown RBP21.47■■□□□ 1.03
SREBF1-216ENST00000490796 TBX20Q9UMR3 447 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 INSL5Q9Y5Q6 135 aa21.47■■□□□ 1.03
SREBF1-216ENST00000490796 KANSL1LA0AUZ9 987 aa21.46■■□□□ 1.03
SREBF1-216ENST00000490796 TBC1D4O60343 1298 aa21.46■■□□□ 1.03
SREBF1-216ENST00000490796 ABCD1P33897 745 aa21.46■■□□□ 1.03
SREBF1-216ENST00000490796 YWHAHQ04917 246 aaPredicted RBP21.46■■□□□ 1.03
SREBF1-216ENST00000490796 ADCY1Q08828 1119 aa21.46■■□□□ 1.03
SREBF1-216ENST00000490796 DSTYKQ6XUX3 929 aa21.46■■□□□ 1.03
SREBF1-216ENST00000490796 MAFFQ9ULX9 164 aa21.46■■□□□ 1.03
SREBF1-216ENST00000490796 TTC26A0AVF1 554 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 VPS37CA5D8V6 355 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-216ENST00000490796 OGTO15294 1046 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 MEFVO15553 781 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-216ENST00000490796 TRAK2O60296 914 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 ECI2O75521 394 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 SEC24AO95486 1093 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 CEBPBP17676 345 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 PLCG1P19174 1290 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 CYP3A5P20815 502 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 MCM6Q14566 821 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 UBXN2BQ14CS0 331 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 KARSQ15046 597 aaKnown RBP21.45■■□□□ 1.02
SREBF1-216ENST00000490796 SLC5A9Q2M3M2 681 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 RAD54LQ92698 747 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 MSTO1Q9BUK6 570 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 OXCT2Q9BYC2 517 aaPredicted RBP21.45■■□□□ 1.02
SREBF1-216ENST00000490796 BCO2Q9BYV7 579 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 MYO15AQ9UKN7 3530 aa21.45■■□□□ 1.02
SREBF1-216ENST00000490796 LACTBL1A8MY62 500 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 LRPAP1P30533 357 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 TNFSF9P41273 254 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 TWF1Q12792 350 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 SF3A1Q15459 793 aaKnown RBP21.44■■□□□ 1.02
SREBF1-216ENST00000490796 ZC3H14Q6PJT7 736 aaKnown RBP21.44■■□□□ 1.02
SREBF1-216ENST00000490796 C1orf210Q8IVY1 113 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 ADSSL1Q8N142 457 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 BEST2Q8NFU1 509 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 TSPAN18Q96SJ8 248 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 HAPLN2Q9GZV7 340 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 SEMA4AQ9H3S1 761 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 TIMM13Q9Y5L4 95 aaPredicted RBP21.44■■□□□ 1.02
SREBF1-216ENST00000490796 MYH15Q9Y2K3 1946 aa21.44■■□□□ 1.02
SREBF1-216ENST00000490796 EP300Q09472 2414 aaPredicted RBP21.43■■□□□ 1.02
SREBF1-216ENST00000490796 PDCP20941 246 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 CD302Q8IX05 232 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 KRI1Q8N9T8 703 aaKnown RBP21.43■■□□□ 1.02
SREBF1-216ENST00000490796 LEMD2Q8NC56 503 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 LARP4BQ92615 738 aaKnown RBP21.43■■□□□ 1.02
SREBF1-216ENST00000490796 ELSPBP1Q96BH3 223 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 ZFP14Q9HCL3 533 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 ASAH2Q9NR71 780 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 SPTBN4Q9H254 2564 aa21.43■■□□□ 1.02
SREBF1-216ENST00000490796 FAM170BA6NMN3 283 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 M0QZQ0 153 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 MICAL2O94851 1124 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 PIGRP01833 764 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 MYL4P12829 197 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 ZNF131P52739 623 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 PLD1Q13393 1074 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 ENOX2Q16206 610 aaKnown RBP21.42■■□□□ 1.02
SREBF1-216ENST00000490796 TANGO2Q6ICL3 276 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 RNF19BQ6ZMZ0 732 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 TPRG1Q6ZUI0 275 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 GVINP1Q7Z2Y8 2422 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 KCNN1Q92952 543 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 TCEAL4Q96EI5 215 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 CFAP54Q96N23 3096 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 BRD9Q9H8M2 597 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 BLOC1S4Q9NUP1 217 aa21.42■■□□□ 1.02
SREBF1-216ENST00000490796 SPATA6Q9NWH7 488 aaPredicted RBP21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms