RNA–Protein interactions for RNA: ENST00000490696.5

VPS26A-207, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 800 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-207ENST00000490696 C5orf42Q9H799 3197 aa16.69■□□□□ 0.26
VPS26A-207ENST00000490696 MUC3AQ02505 3323 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 RHOBTB3O94955 611 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 C1RP00736 705 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 AARSP49588 968 aaKnown RBP eCLIP16.68■□□□□ 0.26
VPS26A-207ENST00000490696 SNRPFP62306 86 aaKnown RBP16.68■□□□□ 0.26
VPS26A-207ENST00000490696 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 KNOP1Q1ED39 458 aaKnown RBP16.68■□□□□ 0.26
VPS26A-207ENST00000490696 PDXDC1Q6P996 788 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 BEST2Q8NFU1 509 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 FBXL18Q96ME1 805 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 CLSTN3Q9BQT9 956 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 APOL5Q9BWW9 433 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 RBAKQ9NYW8 714 aaPredicted RBP16.68■□□□□ 0.26
VPS26A-207ENST00000490696 HSPBP1Q9NZL4 362 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 NUB1Q9Y5A7 615 aa16.68■□□□□ 0.26
VPS26A-207ENST00000490696 BDP1A6H8Y1 2624 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 ANO9A1A5B4 782 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 PPEF2O14830 753 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 SYN3O14994 580 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 ADAM12O43184 909 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 GLUD1P00367 558 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 MCM4P33991 863 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 C9orf57Q5W0N0 161 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 KANK3Q6NY19 840 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 LILRA6Q6PI73 481 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 HS2ST1Q7LGA3 356 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 NT5DC4Q86YG4 428 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 CBWD2Q8IUF1 395 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 C12orf76Q8N812 135 aaPredicted RBP16.67■□□□□ 0.26
VPS26A-207ENST00000490696 ADAM7Q9H2U9 754 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 CGNQ9P2M7 1197 aaKnown RBP16.67■□□□□ 0.26
VPS26A-207ENST00000490696 MTRRQ9UBK8 725 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 RAPGEFL1Q9UHV5 662 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 PLXNA3P51805 1871 aa16.67■□□□□ 0.26
VPS26A-207ENST00000490696 M0QZQ0 153 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 PIRO00625 290 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 CLIC2O15247 247 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 TGM5O43548 720 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 ZP2Q05996 745 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 ITIH3Q06033 890 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 MRPL58Q14197 206 aaKnown RBP16.66■□□□□ 0.26
VPS26A-207ENST00000490696 KCNB1Q14721 858 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 VARS2Q5ST30 1063 aaKnown RBP16.66■□□□□ 0.26
VPS26A-207ENST00000490696 RSPO2Q6UXX9 243 aaPredicted RBP16.66■□□□□ 0.26
VPS26A-207ENST00000490696 ANKS3Q6ZW76 656 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 PALB2Q86YC2 1186 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 GLYCTKQ8IVS8 523 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 C12orf56Q8IXR9 622 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 CCDC34Q96HJ3 373 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 KIAA1586Q9HCI6 787 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 MAN1C1Q9NR34 630 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 DPP3Q9NY33 737 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 PRKAG3Q9UGI9 489 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 CDH22Q9UJ99 828 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 BACE2Q9Y5Z0 518 aa16.66■□□□□ 0.26
VPS26A-207ENST00000490696 ZNF233A6NK53 670 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 TBC1D4O60343 1298 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 GADD45BO75293 160 aaPredicted RBP16.65■□□□□ 0.26
VPS26A-207ENST00000490696 LILRA4P59901 499 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 PNOCQ13519 176 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 RARS2Q5T160 578 aaKnown RBP16.65■□□□□ 0.26
VPS26A-207ENST00000490696 ADHFE1Q8IWW8 467 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 NOC3LQ8WTT2 800 aaKnown RBP16.65■□□□□ 0.26
VPS26A-207ENST00000490696 CCDC47Q96A33 483 aaKnown RBP16.65■□□□□ 0.26
VPS26A-207ENST00000490696 TIGD1Q96MW7 591 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 KCTD10Q9H3F6 313 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 SFXN1Q9H9B4 322 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 PDE11AQ9HCR9 933 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 CD320Q9NPF0 282 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
VPS26A-207ENST00000490696 SCN1AP35498 2009 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 C19orf67A6NJJ6 358 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 SPTLC1O15269 473 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 PAPLNO95428 1278 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 SPATA31D3P0C874 917 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 OR1D2P34982 312 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 CYP2J2P51589 502 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 TFAMQ00059 246 aaKnown RBP16.64■□□□□ 0.25
VPS26A-207ENST00000490696 RAB33AQ14088 237 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 CBX2Q14781 532 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-207ENST00000490696 SNRNP35Q16560 246 aaKnown RBP16.64■□□□□ 0.25
VPS26A-207ENST00000490696 CES5AQ6NT32 575 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 SPATA31D4Q6ZUB0 917 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 XXYLT1Q8NBI6 393 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 APPL2Q8NEU8 664 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 CMASQ8NFW8 434 aaPredicted RBP16.64■□□□□ 0.25
VPS26A-207ENST00000490696 GOLGA5Q8TBA6 731 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 HDAC7Q8WUI4 952 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 TMEM174Q8WUU8 243 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 FAM122AQ96E09 287 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 FAM84AQ96KN4 292 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 PLEKHA4Q9H4M7 779 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 DPP7Q9UHL4 492 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 CDY1Q9Y6F8 540 aa16.64■□□□□ 0.25
VPS26A-207ENST00000490696 MTCL1Q9Y4B5 1905 aaKnown RBP16.63■□□□□ 0.25
VPS26A-207ENST00000490696 WEE2P0C1S8 567 aa16.63■□□□□ 0.25
VPS26A-207ENST00000490696 PAX3P23760 479 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms