RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZBED2Q9BTP6 218 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CARD9Q9H257 536 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SLCO1B7G3V0H7 640 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SLC16A4O15374 487 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CLASP2O75122 1294 aaKnown RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 MYL2P10916 166 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 FBXW4P57775 412 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 LRRC8EQ6NSJ5 796 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 BBS7Q8IWZ6 715 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 DDI1Q8WTU0 396 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 RBBP8Q99708 897 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 IGF2BP3O00425 579 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 KCNN4O15554 427 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CDC25AP30304 524 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 PURAQ00577 322 aaKnown RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SWSAP1Q6NVH7 229 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 NFRKBQ6P4R8 1299 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 TBC1D10CQ8IV04 446 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 RNF217Q8TC41 542 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 WRNIP1Q96S55 665 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SIKE1Q9BRV8 207 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 GSG1L2A8MUP6 293 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SNRPAP09012 282 aaKnown RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SPATA2LQ8IUW3 424 aaPredicted RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 C5orf58C9J3I9 102 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 RUNX1T1Q06455 604 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 STX5Q13190 355 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 TMEM132DQ14C87 1099 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 NCAPHQ15003 741 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 QRICH1Q2TAL8 776 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 TTLL9Q3SXZ7 439 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 C12orf60Q5U649 245 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 ATPAF2Q8N5M1 289 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SH3GL1Q99961 368 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 PHF20Q9BVI0 1012 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 VIRMAQ69YN4 1812 aaKnown RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 POTEFA5A3E0 1075 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 ANXA9O76027 345 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 POTEIP0CG38 1075 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 RAD23BP54727 409 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 NFX1Q12986 1120 aaKnown RBP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 STX3Q13277 289 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 NAPEPLDQ6IQ20 393 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 POTEGQ6S5H5 508 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 POTEEQ6S8J3 1075 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 HHIPL2Q6UWX4 724 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 CCNYL1Q8N7R7 359 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 SLC13A1Q9BZW2 595 aa9.28□□□□□ -0.92
LSAMP-205ENST00000490035 FTOQ9C0B1 505 aaKnown RBP eCLIP9.28□□□□□ -0.92
LSAMP-205ENST00000490035 RXRGP48443 463 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 DPYDQ12882 1025 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 FAM47EQ6ZV65 393 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 XPO7Q9UIA9 1087 aaKnown RBP9.27□□□□□ -0.92
LSAMP-205ENST00000490035 SORBS3O60504 671 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 NDUFS3O75489 264 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 RGS2P41220 211 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 KCNA1Q09470 495 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 CCDC92Q53HC0 331 aaPredicted RBP9.27□□□□□ -0.92
LSAMP-205ENST00000490035 WLSQ5T9L3 541 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 PID1Q7Z2X4 250 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 SUGP1Q8IWZ8 645 aaKnown RBP9.27□□□□□ -0.92
LSAMP-205ENST00000490035 DDIASQ8IXT1 998 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 NT5C1AQ9BXI3 368 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 FBXO2Q9UK22 296 aaPredicted RBP9.27□□□□□ -0.92
LSAMP-205ENST00000490035 FBXL5Q9UKA1 691 aa9.27□□□□□ -0.92
LSAMP-205ENST00000490035 ITIH4Q14624 930 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 LBRQ14739 615 aaKnown RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 DCAF4L1Q3SXM0 396 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ERGIC2Q96RQ1 377 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ISCUQ9H1K1 167 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 PRDM16Q9HAZ2 1276 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 FAM217BQ9NTX9 383 aaPredicted RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 EVPLLA8MZ36 301 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 TCP11X1B4DZS4 312 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 GOLGA8RI6L899 631 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 MMP10P09238 476 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 STAT5BP51692 787 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 Q3C1V9 767 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 LCA5Q86VQ0 697 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 PTPRN2Q92932 1015 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 CDK5RAP1Q96SZ6 601 aaKnown RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 NDFIP2Q9NV92 336 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 NEU2Q9Y3R4 380 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 EXTL3O43909 919 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 PRKAA2P54646 552 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ARPP19P56211 112 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ST8SIA6P61647 398 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 SKOR1P84550 965 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 PASD1Q8IV76 773 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ZNF518BQ9C0D4 1074 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 FAM49AQ9H0Q0 323 aaPredicted RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 GIMAP4Q9NUV9 329 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 DCDC2Q9UHG0 476 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 TMEM253P0C7T8 217 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 ADCY1Q08828 1119 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 AARS2Q5JTZ9 985 aaKnown RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 NOP9Q86U38 636 aaKnown RBP9.27□□□□□ -0.93
LSAMP-205ENST00000490035 SLC35G2Q8TBE7 412 aa9.27□□□□□ -0.93
LSAMP-205ENST00000490035 RNF25Q96BH1 459 aaPredicted RBP9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms