RNA–Protein interactions for RNA: ENST00000489406.1

UFD1-209, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 994 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-209ENST00000489406 ZNF579Q8NAF0 562 aaKnown RBP16.7■□□□□ 0.26
UFD1-209ENST00000489406 PIP4K2CQ8TBX8 421 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 SLC7A3Q8WY07 619 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 RIT2Q99578 217 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 GTPBP2Q9BX10 602 aaKnown RBP16.7■□□□□ 0.26
UFD1-209ENST00000489406 GLT8D2Q9H1C3 349 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 FSCN3Q9NQT6 498 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 TMEM74BQ9NUR3 256 aa16.7■□□□□ 0.26
UFD1-209ENST00000489406 INO80B-WBP1J3KQ70 363 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 DPYSL4O14531 572 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 FTH1P19P0C7X4 201 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 ARF4P18085 180 aaPredicted RBP16.69■□□□□ 0.26
UFD1-209ENST00000489406 EPHA5P54756 1037 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 CACNB1Q02641 598 aaPredicted RBP16.69■□□□□ 0.26
UFD1-209ENST00000489406 DMC1Q14565 340 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 STXBP5Q5T5C0 1151 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 SLC8B1Q6J4K2 584 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 CASC1Q6TDU7 716 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 ARMCX6Q7L4S7 300 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 SYT13Q7L8C5 426 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 FANCBQ8NB91 859 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 LEMD2Q8NC56 503 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 RPLP0P6Q8NHW5 317 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 CAMK1GQ96NX5 476 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
UFD1-209ENST00000489406 ZMYM2Q9UBW7 1377 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 A0A1W2PRU2 124 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 PTGESO14684 152 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 THP07101 528 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 ABCG1P45844 678 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 CYP4F3Q08477 520 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 TWF1Q12792 350 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 HNRNPDQ14103 355 aaKnown RBP16.68■□□□□ 0.26
UFD1-209ENST00000489406 SCUBE3Q8IX30 993 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 SLC5A5Q92911 643 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 FBRSL1Q9HCM7 1045 aaKnown RBP16.68■□□□□ 0.26
UFD1-209ENST00000489406 BARHL2Q9NY43 387 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 DKK4Q9UBT3 224 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 V9GY48 417 aaPredicted RBP16.68■□□□□ 0.26
UFD1-209ENST00000489406 CNTNAP5Q8WYK1 1306 aa16.68■□□□□ 0.26
UFD1-209ENST00000489406 PYCARD-AS1I3L0S3 204 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 B4GALT5O43286 388 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 PRC1O43663 620 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 OPHN1O60890 802 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 B3GAT3O94766 335 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 CD59P13987 128 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 CIITAP33076 1130 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 PTENP60484 403 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 PTPAQ15257 358 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 PCBP1Q15365 356 aaKnown RBP eCLIP16.67■□□□□ 0.26
UFD1-209ENST00000489406 NAB2Q15742 525 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 MAPK6Q16659 721 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 AMHR2Q16671 573 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 SLC27A1Q6PCB7 646 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 FERMT3Q86UX7 667 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 TMTC2Q8N394 836 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 LSM14AQ8ND56 463 aaKnown RBP16.67■□□□□ 0.26
UFD1-209ENST00000489406 RDM1Q8NG50 284 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 DCBLD2Q96PD2 775 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 PCDHB9Q9Y5E1 797 aa16.67■□□□□ 0.26
UFD1-209ENST00000489406 SH2B2O14492 632 aaPredicted RBP16.66■□□□□ 0.26
UFD1-209ENST00000489406 TRDMT1O14717 391 aaKnown RBP16.66■□□□□ 0.26
UFD1-209ENST00000489406 ASAP2O43150 1006 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 CFIP05156 583 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 BRCC3P46736 316 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 PLCB2Q00722 1185 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 SLC23A3Q6PIS1 610 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 MICU3Q86XE3 530 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 SYT12Q8IV01 421 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 TSTD1Q8NFU3 115 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 OR2I1PQ8NGU4 316 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 EXOC6Q8TAG9 804 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
UFD1-209ENST00000489406 SLC12A7Q9Y666 1083 aa16.66■□□□□ 0.26
UFD1-209ENST00000489406 ATXN2Q99700 1313 aaKnown RBP16.66■□□□□ 0.26
UFD1-209ENST00000489406 ADAMTS9Q9P2N4 1935 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 SH3BP5O60239 455 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 PTGER3P43115 390 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 PTH1RQ03431 593 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 CFHR1Q03591 330 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 KCNC4Q03721 635 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 MBTD1Q05BQ5 628 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 SRSF1Q07955 248 aaKnown RBP eCLIP16.65■□□□□ 0.26
UFD1-209ENST00000489406 CD300LGQ6UXG3 332 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 DAGLBQ8NCG7 672 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 BPIFB1Q8TDL5 484 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 CHFRQ96EP1 664 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 LNPKQ9C0E8 428 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 GON4LQ3T8J9 2241 aa16.65■□□□□ 0.26
UFD1-209ENST00000489406 PI4KAP42356 2102 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 hCG_1984214I3L0E3 225 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 TNFRSF10BO14763 440 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 CAPN9O14815 690 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 MAP3K13O43283 966 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 PSMD10O75832 226 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 U2AF2P26368 475 aaKnown RBP eCLIP16.64■□□□□ 0.253e-8■■■■□ 20.2
UFD1-209ENST00000489406 ITPKBP27987 946 aa16.64■□□□□ 0.25
UFD1-209ENST00000489406 GALK1P51570 392 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms