RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PPEF2O14830 753 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 NFICP08651 508 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 ME1P48163 572 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SIGLEC14Q08ET2 396 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SPATA1Q5VX52 437 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SLC8B1Q6J4K2 584 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 CRELD2Q6UXH1 353 aaPredicted RBP27.15■■□□□ 1.94
HMGN1-217ENST00000489072 CD302Q8IX05 232 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SLC7A14Q8TBB6 771 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 POMGNT1Q8WZA1 660 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 TSPAN18Q96SJ8 248 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 TRIM9Q9C026 710 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SMOC2Q9H3U7 446 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SORCS3Q9UPU3 1222 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 ZDHHC9Q9Y397 364 aa27.15■■□□□ 1.94
HMGN1-217ENST00000489072 SCN1AP35498 2009 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 NOTCH4Q99466 2003 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 HNRNPA1P09651 372 aaKnown RBP eCLIP27.14■■□□□ 1.94
HMGN1-217ENST00000489072 ROR1Q01973 937 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 PPM1LQ5SGD2 360 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 CCDC65Q8IXS2 484 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 IQUBQ8NA54 791 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 ASIC4Q96FT7 647 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 MYADMQ96S97 322 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 FBXL5Q9UKA1 691 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 RCOR1Q9UKL0 485 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 PCDHB8Q9UN66 801 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 EXOC7Q9UPT5 735 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 PCDHB13Q9Y5F0 798 aa27.14■■□□□ 1.94
HMGN1-217ENST00000489072 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.14■■□□□ 1.94
HMGN1-217ENST00000489072 CCL16O15467 120 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 XPOTO43592 962 aaKnown RBP27.13■■□□□ 1.93
HMGN1-217ENST00000489072 HOXA9P31269 272 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 AARSP49588 968 aaKnown RBP eCLIP27.13■■□□□ 1.93
HMGN1-217ENST00000489072 MTMR3Q13615 1198 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 RESP18Q5W5W9 173 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 GLIS3Q8NEA6 775 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 ZSWIM2Q8NEG5 633 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 HPS3Q969F9 1004 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 CHAMP1Q96JM3 812 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 CFAP45Q9UL16 551 aa27.13■■□□□ 1.93
HMGN1-217ENST00000489072 WDR27A2RRH5 827 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 H7C4K7 107 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 M0QZQ0 153 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 POLR2DO15514 142 aaKnown RBP27.12■■□□□ 1.93
HMGN1-217ENST00000489072 PRPF6O94906 941 aaKnown RBP27.12■■□□□ 1.93
HMGN1-217ENST00000489072 GBP2P32456 591 aaPredicted RBP27.12■■□□□ 1.93
HMGN1-217ENST00000489072 NTHL1P78549 312 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 ALCAMQ13740 583 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 TMEM132DQ14C87 1099 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 POSTNQ15063 836 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 CTXN3Q4LDR2 81 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 BMP8AQ7Z5Y6 402 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 GRASPQ7Z6J2 395 aaPredicted RBP27.12■■□□□ 1.93
HMGN1-217ENST00000489072 APPL2Q8NEU8 664 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 BEST2Q8NFU1 509 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 LRRC27Q9C0I9 530 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 ASB7Q9H672 318 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 DERAQ9Y315 318 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 HCN4Q9Y3Q4 1203 aa27.12■■□□□ 1.93
HMGN1-217ENST00000489072 WDFY4Q6ZS81 3184 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 ABLIM3O94929 683 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 ARPP19P56211 112 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 UVSSAQ2YD98 709 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 CNNM4Q6P4Q7 775 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 ZNF461Q8TAF7 563 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 TIMM13Q9Y5L4 95 aaPredicted RBP27.11■■□□□ 1.93
HMGN1-217ENST00000489072 TCHHQ07283 1943 aa27.11■■□□□ 1.93
HMGN1-217ENST00000489072 WNT7BP56706 349 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 ASIC1P78348 528 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 POU5F1Q01860 360 aaKnown RBP27.1■■□□□ 1.93
HMGN1-217ENST00000489072 C9orf57Q5W0N0 161 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 ZNF280DQ6N043 979 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 GET4Q7L5D6 327 aaPredicted RBP27.1■■□□□ 1.93
HMGN1-217ENST00000489072 UBALD2Q8IYN6 164 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 SYCP3Q8IZU3 236 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 PBXIP1Q96AQ6 731 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 SAAL1Q96ER3 474 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 C7orf25Q9BPX7 421 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 EPS15L1Q9UBC2 864 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 C2CD2Q9Y426 696 aa27.1■■□□□ 1.93
HMGN1-217ENST00000489072 TSC2P49815 1807 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 SPTLC1O15269 473 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 POU2F2P09086 479 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 CASP1P29466 404 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 AMPD3Q01432 767 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 EFCAB13Q8IY85 973 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 CBWD1Q9BRT8 395 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 FAM213AQ9BRX8 229 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 KCNK12Q9HB15 430 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 HCFC1R1Q9NWW0 138 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 FAM13BQ9NYF5 915 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 POLIQ9UNA4 740 aa27.09■■□□□ 1.93
HMGN1-217ENST00000489072 ANO9A1A5B4 782 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 PIRO00625 290 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 XYLBO75191 536 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 GARTP22102 1010 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 FSHRP23945 695 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 LILRA4P59901 499 aa27.08■■□□□ 1.93
HMGN1-217ENST00000489072 DSTYKQ6XUX3 929 aa27.08■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms