RNA–Protein interactions for RNA: ENST00000488639.6

CEACAM1-212, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 3

Gene CEACAM1, Length 429 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-212ENST00000488639 ZNF697Q5TEC3 545 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 PDE12Q6L8Q7 609 aaKnown RBP12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 LRSAM1Q6UWE0 723 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 C11orf57Q6ZUT1 292 aaPredicted RBP12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 C18orf25Q96B23 403 aaPredicted RBP12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 CCDC127Q96BQ5 260 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 MED15Q96RN5 788 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 CXCL16Q9H2A7 254 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 MAGEC2Q9UBF1 373 aaPredicted RBP12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 PUF60Q9UHX1 559 aaKnown RBP12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 NFE2L3Q9Y4A8 694 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 PLXNA4Q9HCM2 1894 aa12.65□□□□□ -0.38
CEACAM1-212ENST00000488639 COL4A4P53420 1690 aaPredicted RBP12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 CASTOR2A6NHX0 329 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 PIRO00625 290 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 P4HA2O15460 535 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 TADA2AO75478 443 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 FGF18O76093 207 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 STAU1O95793 577 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 ATICP31939 592 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 CLCNKBP51801 687 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 WNT7BP56706 349 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 ZNF445P59923 1031 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 SOX4Q06945 474 aaPredicted RBP12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 CETN1Q12798 172 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 MYO1EQ12965 1108 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 ZACNQ401N2 412 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 C9orf57Q5W0N0 161 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 PDXDC1Q6P996 788 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 TRAPPC11Q7Z392 1133 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 DDX53Q86TM3 631 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 TRIM59Q8IWR1 403 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 C1orf127Q8N9H9 656 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 ANKRD20A12PQ8NF67 263 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 TAF4BQ92750 862 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 FAXDC2Q96IV6 333 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 CNOT6LQ96LI5 555 aaKnown RBP12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 C17orf80Q9BSJ5 609 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 MTMR12Q9C0I1 747 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 TMEM8AQ9HCN3 771 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 LMCD1Q9NZU5 365 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 TUBGCP4Q9UGJ1 667 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 SSX2IPQ9Y2D8 614 aa12.64□□□□□ -0.39
CEACAM1-212ENST00000488639 BECN2A8MW95 431 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 B4GALT3O60512 393 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 B3GAT3O94766 335 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 ARHGEF15O94989 841 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 EFEMP2O95967 443 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 TPM2P07951 284 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 AARSP49588 968 aaKnown RBP eCLIP12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 TAF6P49848 677 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 TPM4P67936 248 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 TRPC3Q13507 836 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 SV2CQ496J9 727 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 CDKAL1Q5VV42 579 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 KRT39Q6A163 491 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 C15orf39Q6ZRI6 1047 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 IRF2BP1Q8IU81 584 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 RNF168Q8IYW5 571 aaPredicted RBP12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 KLHL23Q8NBE8 558 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 SPATA18Q8TC71 538 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 PLEKHO2Q8TD55 490 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 SLC35C1Q96A29 364 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 EEF2KMTQ96G04 330 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 VRTNQ9H8Y1 702 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 GOLGA2P5Q9HBQ8 144 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 MARCH5Q9NX47 278 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 HCSTQ9UBK5 93 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 PRG3Q9Y2Y8 225 aaPredicted RBP12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 NUB1Q9Y5A7 615 aa12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.63□□□□□ -0.39
CEACAM1-212ENST00000488639 PTPRJQ12913 1337 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 SCN1AP35498 2009 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 FSD2A1L4K1 749 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 SOX1O00570 391 aaPredicted RBP12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 SYN3O14994 580 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 PHACTR2O75167 634 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 KIF4AO95239 1232 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 C4BPAP04003 597 aaKnown RBP12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 SOD2P04179 222 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 ITGB3P05106 788 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 FAM163BP0C2L3 166 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 MXI1P50539 228 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 LILRA4P59901 499 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 DLG4P78352 724 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 CREMQ03060 361 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 GPM6BQ13491 265 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 MAN2A1Q16706 1144 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 PTPROQ16827 1216 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 DCAF17Q5H9S7 520 aaPredicted RBP12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 C1orf220Q5T0J3 134 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 TCERG1LQ5VWI1 586 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 TDRD10Q5VZ19 366 aaKnown RBP12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 SMYD5Q6GMV2 418 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 FUT10Q6P4F1 479 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 SV2AQ7L0J3 742 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 CCDC150Q8NCX0 1101 aa12.62□□□□□ -0.39
CEACAM1-212ENST00000488639 OR5B17Q8NGF7 314 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms