RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 ANO9A1A5B4 782 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 EIF3DO15371 548 aaKnown RBP eCLIP15.43■□□□□ 0.06
COL9A2-208ENST00000488463 TRAPPC3O43617 180 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 RFPL2O75678 378 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 SPATA31D3P0C874 917 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 CREMQ03060 361 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 RAB33AQ14088 237 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 BMT2Q1RMZ1 405 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 TMC5Q6UXY8 1006 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 SPATA31D4Q6ZUB0 917 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 GLYCTKQ8IVS8 523 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 EFCAB13Q8IY85 973 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 POP1Q99575 1024 aaKnown RBP15.43■□□□□ 0.06
COL9A2-208ENST00000488463 PLEKHA4Q9H4M7 779 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 TMEM206Q9H813 350 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 FBXW11Q9UKB1 542 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 DERAQ9Y315 318 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 C2CD2Q9Y426 696 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 NOTCH4Q99466 2003 aa15.43■□□□□ 0.06
COL9A2-208ENST00000488463 PI4K2BG5E9Z4 385 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 M0QZQ0 153 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 SYN3O14994 580 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 SSTR3P32745 418 aaPredicted RBP15.42■□□□□ 0.06
COL9A2-208ENST00000488463 MTHFRP42898 656 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 NUCB2P80303 420 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 VARS2Q5ST30 1063 aaKnown RBP15.42■□□□□ 0.06
COL9A2-208ENST00000488463 SLC8B1Q6J4K2 584 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 CES5AQ6NT32 575 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 PDXDC1Q6P996 788 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 C15orf39Q6ZRI6 1047 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 BRSK2Q8IWQ3 736 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 KREMEN2Q8NCW0 462 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 CXorf38Q8TB03 319 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 SAAL1Q96ER3 474 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 NECTIN4Q96NY8 510 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 LRFN3Q9BTN0 628 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 C1QTNF1Q9BXJ1 281 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 C11orf16Q9NQ32 467 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 USP25Q9UHP3 1055 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.42■□□□□ 0.06
COL9A2-208ENST00000488463 ZDBF2Q9HCK1 2354 aa15.42■□□□□ 0.06
COL9A2-208ENST00000488463 PIRO00625 290 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 SPTLC1O15269 473 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 EXTL3O43909 919 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 OR1D2P34982 312 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 TMEM132DQ14C87 1099 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 C9orf57Q5W0N0 161 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 SCARA3Q6AZY7 606 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 ANKS3Q6ZW76 656 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 RNF135Q8IUD6 432 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 CEP57L1Q8IYX8 460 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 SYCP3Q8IZU3 236 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 FSIP1Q8NA03 581 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 FAM212AQ96EL1 285 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 RPGRIP1Q96KN7 1286 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 RIPOR3Q96MK2 946 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 FAM213AQ9BRX8 229 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 PCIF1Q9H4Z3 704 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 CDY1Q9Y6F8 540 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 WDFY4Q6ZS81 3184 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 UBE4BO95155 1302 aa15.41■□□□□ 0.06
COL9A2-208ENST00000488463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.4■□□□□ 0.06
COL9A2-208ENST00000488463 CCDC195A0A1B0GUA6 201 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 GOLGA8IPA6NC78 632 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 GOLGA8JA6NMD2 632 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 ZMYND10O75800 440 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 ABLIM3O94929 683 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 IL18RAPO95256 599 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 PRR29P0C7W0 189 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 ANP32AP39687 249 aaKnown RBP15.4■□□□□ 0.06
COL9A2-208ENST00000488463 SYKP43405 635 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 LILRA4P59901 499 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 STK4Q13043 487 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 ATAT1Q5SQI0 421 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 KIAA0895Q8NCT3 520 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 BEST2Q8NFU1 509 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 BORCS6Q96GS4 357 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 FAM84AQ96KN4 292 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 SLC39A2Q9NP94 309 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 AGPAT3Q9NRZ7 376 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 ZDHHC7Q9NXF8 308 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 PCDHB8Q9UN66 801 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 NUB1Q9Y5A7 615 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 MUC6Q6W4X9 2439 aa15.4■□□□□ 0.06
COL9A2-208ENST00000488463 C2CD4DB7Z1M9 353 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 XPOTO43592 962 aaKnown RBP15.39■□□□□ 0.05
COL9A2-208ENST00000488463 N4BP1O75113 896 aaKnown RBP15.39■□□□□ 0.05
COL9A2-208ENST00000488463 OAZ2O95190 189 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 LDHAP00338 332 aaKnown RBP15.39■□□□□ 0.05
COL9A2-208ENST00000488463 MYL1P05976 194 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 MCM4P33991 863 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 ROR1Q01973 937 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 CYP26C1Q6V0L0 522 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 KRBA2Q6ZNG9 492 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 STXBP4Q6ZWJ1 553 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 NT5DC4Q86YG4 428 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 CBWD2Q8IUF1 395 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 GPD1LQ8N335 351 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
COL9A2-208ENST00000488463 GZF1Q9H116 711 aaPredicted RBP15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms