RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 TPGS2Q68CL5 300 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 ZNF280DQ6N043 979 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 TCEAL8Q8IYN2 117 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 KRI1Q8N9T8 703 aaKnown RBP24.6■■□□□ 1.53
PTPN4-211ENST00000488279 TSPAN18Q96SJ8 248 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 MSTO1Q9BUK6 570 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 RPP25Q9BUL9 199 aaKnown RBP24.6■■□□□ 1.53
PTPN4-211ENST00000488279 CYP4F11Q9HBI6 524 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 CCDC39Q9UFE4 941 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 UBQLN1Q9UMX0 589 aaKnown RBP24.6■■□□□ 1.53
PTPN4-211ENST00000488279 PCDHB8Q9UN66 801 aa24.6■■□□□ 1.53
PTPN4-211ENST00000488279 CACNA1HO95180 2353 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 A0A0B4J269 797 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 XPOTO43592 962 aaKnown RBP24.59■■□□□ 1.53
PTPN4-211ENST00000488279 RHOP08100 348 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 PTPN2P17706 415 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 SYT1P21579 422 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 GTF2BQ00403 316 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 PTPAQ15257 358 aa24.59■■□□□ 1.53
PTPN4-211ENST00000488279 ENOX2Q16206 610 aaKnown RBP24.59■■□□□ 1.53
PTPN4-211ENST00000488279 SRPRBQ9Y5M8 271 aaKnown RBP24.59■■□□□ 1.53
PTPN4-211ENST00000488279 DOCK8Q8NF50 2099 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 VPS13AQ96RL7 3174 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 FAM189A1O60320 539 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 NMT1P30419 496 aaKnown RBP24.58■■□□□ 1.53
PTPN4-211ENST00000488279 ZBTB41Q5SVQ8 909 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 USP49Q70CQ1 688 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 NPAS3Q8IXF0 933 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 CCDC105Q8IYK2 499 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 INTS4Q96HW7 963 aaKnown RBP24.58■■□□□ 1.53
PTPN4-211ENST00000488279 FIZ1Q96SL8 496 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 AVENQ9NQS1 362 aaPredicted RBP24.58■■□□□ 1.53
PTPN4-211ENST00000488279 ARHGEF3Q9NR81 526 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 GDE1Q9NZC3 331 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 MAFFQ9ULX9 164 aa24.58■■□□□ 1.53
PTPN4-211ENST00000488279 MYO15AQ9UKN7 3530 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 MYH11P35749 1972 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 M0QZQ0 153 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 ADRB2P07550 413 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 GPC5P78333 572 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 RESTQ13127 1097 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 PHLDB3Q6NSJ2 640 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 MAP4K3Q8IVH8 894 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 CD302Q8IX05 232 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 DTWD2Q8NBA8 298 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 FAM212AQ96EL1 285 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 OXCT2Q9BYC2 517 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-211ENST00000488279 TBC1D17Q9HA65 648 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 STK17AQ9UEE5 414 aa24.57■■□□□ 1.52
PTPN4-211ENST00000488279 FBXO2Q9UK22 296 aaPredicted RBP24.57■■□□□ 1.52
PTPN4-211ENST00000488279 CITO14578 2027 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 OAZ2O95190 189 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 SEC24AO95486 1093 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 TXLNAP40222 546 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 CEBPZQ03701 1054 aaKnown RBP24.56■■□□□ 1.52
PTPN4-211ENST00000488279 YWHAHQ04917 246 aaPredicted RBP24.56■■□□□ 1.52
PTPN4-211ENST00000488279 ADCY1Q08828 1119 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 RRAGBQ5VZM2 374 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 TMEM130Q8N3G9 435 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 ING5Q8WYH8 240 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 SHDQ96IW2 340 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 ST6GALNAC4Q9H4F1 302 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 AFF4Q9UHB7 1163 aaKnown RBP24.56■■□□□ 1.52
PTPN4-211ENST00000488279 CPSF3Q9UKF6 684 aaKnown RBP24.56■■□□□ 1.52
PTPN4-211ENST00000488279 INSL5Q9Y5Q6 135 aa24.56■■□□□ 1.52
PTPN4-211ENST00000488279 GFRA3O60609 400 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 ZC2HC1CQ53FD0 456 aaPredicted RBP24.55■■□□□ 1.52
PTPN4-211ENST00000488279 SPATA1Q5VX52 437 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 SLFN12LQ6IEE8 588 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 FAM173BQ6P4H8 233 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 SLC39A4Q6P5W5 647 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 DSTYKQ6XUX3 929 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 DYMQ7RTS9 669 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 USP37Q86T82 979 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 ELMOD1Q8N336 334 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 BEST2Q8NFU1 509 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 MCRS1Q96EZ8 462 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 CLIC6Q96NY7 704 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 CORO1BQ9BR76 489 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 BACH2Q9BYV9 841 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 TIMM13Q9Y5L4 95 aaPredicted RBP24.55■■□□□ 1.52
PTPN4-211ENST00000488279 DOCK6Q96HP0 2047 aa24.55■■□□□ 1.52
PTPN4-211ENST00000488279 PROB1E7EW31 1015 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 ZNF197O14709 1029 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 CPB1P15086 417 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 AARSP49588 968 aaKnown RBP eCLIP24.54■■□□□ 1.52
PTPN4-211ENST00000488279 GUCY2FP51841 1108 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 SLC5A9Q2M3M2 681 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 ADALQ6DHV7 355 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 IQCEQ6IPM2 695 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 SV2BQ7L1I2 683 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 ZNF720Q7Z2F6 126 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 ZNF512Q96ME7 567 aaPredicted RBP24.54■■□□□ 1.52
PTPN4-211ENST00000488279 KXD1Q9BQD3 176 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 SIT1Q9Y3P8 196 aa24.54■■□□□ 1.52
PTPN4-211ENST00000488279 ZFHX2Q9C0A1 2572 aaPredicted RBP24.54■■□□□ 1.52
PTPN4-211ENST00000488279 ANKRD63C9JTQ0 380 aa24.53■■□□□ 1.52
PTPN4-211ENST00000488279 PAX3P23760 479 aa24.53■■□□□ 1.52
PTPN4-211ENST00000488279 NBL1P41271 181 aa24.53■■□□□ 1.52
PTPN4-211ENST00000488279 PFKPQ01813 784 aa24.53■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms