RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 LZTFL1Q9NQ48 299 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 CHST12Q9NRB3 414 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 KCND1Q9NSA2 647 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 RNF19AQ9NV58 838 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 DPP3Q9NY33 737 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 CNTN3Q9P232 1028 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 SIX4Q9UIU6 781 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 ITGA11Q9UKX5 1188 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 POLIQ9UNA4 740 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 DERAQ9Y315 318 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 REXO2Q9Y3B8 237 aaKnown RBP7.43□□□□□ -1.22
PDAP1-203ENST00000488214 NUB1Q9Y5A7 615 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 PCDHB2Q9Y5E7 798 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 BZW2Q9Y6E2 419 aaKnown RBP7.43□□□□□ -1.22
PDAP1-203ENST00000488214 TET1Q8NFU7 2136 aa7.43□□□□□ -1.22
PDAP1-203ENST00000488214 MYH10P35580 1976 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 A0A087X0T9 212 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 FAM170AA1A519 330 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 MEIS3P2A8K0S8 358 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 CYP26A1O43174 497 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 XPOTO43592 962 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 MGEA5O60502 916 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 SGPL1O95470 568 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 FAM228BP0C875 321 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 CLCN1P35523 988 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 ASPAP45381 313 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 RAP1GAPP47736 663 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 VAV2P52735 878 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 TNNC1P63316 161 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 PTPN14Q15678 1187 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 PKN2Q16513 984 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 SLC18A3Q16572 532 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 SGSM1Q2NKQ1 1148 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 TRIM60Q495X7 471 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 TAF3Q5VWG9 929 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 TMEM270Q6UE05 265 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 ZNF571Q7Z3V5 609 aaPredicted RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 IRF2BP2Q7Z5L9 587 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 REXO1L1PQ8IX06 675 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 FAM71AQ8IYT1 594 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 USP38Q8NB14 1042 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 RBBP8NLQ8NC74 664 aaPredicted RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 TAF4BQ92750 862 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 ZNF560Q96MR9 790 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 ZMAT2Q96NC0 199 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 ADAM2Q99965 735 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 PPP1R12CQ9BZL4 782 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 SMYD3Q9H7B4 428 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 LUC7LQ9NQ29 371 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 NXF1Q9UBU9 619 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 NOCTQ9UK39 431 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 UBQLN1Q9UMX0 589 aaKnown RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 TFR2Q9UP52 801 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 AGAP1Q9UPQ3 857 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 ATP11BQ9Y2G3 1177 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 PCDHB4Q9Y5E5 795 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 SQORQ9Y6N5 450 aa7.42□□□□□ -1.22
PDAP1-203ENST00000488214 FNDC1Q4ZHG4 1894 aaPredicted RBP7.42□□□□□ -1.22
PDAP1-203ENST00000488214 DNAH12Q6ZR08 3092 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 KIAA1671Q9BY89 1806 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 SMIM28A0A1B0GU29 152 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 TMCO5BA8MYB1 307 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 DCDC2CA8MYV0 355 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 PITPNM1O00562 1244 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 PPEF2O14830 753 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 ZNF263O14978 683 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 CST3P01034 146 aaPredicted RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 CALCAP01258 141 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 CD4P01730 458 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 P4HA1P13674 534 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 TNNT1P13805 278 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 KCNE1P15382 129 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 CYP11B1P15538 503 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 ACO1P21399 889 aaKnown RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 ANXA13P27216 316 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 GNA15P30679 374 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 MNX1P50219 401 aaPredicted RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 CDK7P50613 346 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 SCNN1GP51170 649 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 YWHAEP62258 255 aaKnown RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 RBP5P82980 135 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 MYO1EQ12965 1108 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 DSC3Q14574 896 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 ASTE1Q2TB18 679 aaPredicted RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 WDR72Q3MJ13 1102 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 SLC39A5Q6ZMH5 540 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 NYAP1Q6ZVC0 841 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 NOP9Q86U38 636 aaKnown RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 SLC47A2Q86VL8 602 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 GLYCTKQ8IVS8 523 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 RPUSD2Q8IZ73 545 aaKnown RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 TXLNBQ8N3L3 684 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 UBR7Q8N806 425 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 LNX1Q8TBB1 728 aaPredicted RBP7.41□□□□□ -1.22
PDAP1-203ENST00000488214 EPS8L1Q8TE68 723 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 LINC01599Q8WXQ3 324 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 ZNF592Q92610 1267 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 HPDLQ96IR7 371 aa7.41□□□□□ -1.22
PDAP1-203ENST00000488214 ZFP42Q96MM3 310 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms