RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 TLK2Q86UE8 772 aa12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 GABPB2Q8TAK5 448 aaPredicted RBP12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 CPB2Q96IY4 423 aa12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 FGD4Q96M96 766 aa12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 WDR18Q9BV38 432 aa12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 CD248Q9HCU0 757 aa12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 FBXL5Q9UKA1 691 aa12.34□□□□□ -0.43
LDLRAP1-207ENST00000488127 SLITRK3O94933 977 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 KRT14P02533 472 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 TGFB3P10600 412 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 LMNB2Q03252 620 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 SEMA3FQ13275 785 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 ACVR2BQ13705 512 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 TRIML2Q8N7C3 387 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 PGBD4Q96DM1 585 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 LRRC37BQ96QE4 947 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 PIDD1Q9HB75 910 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 HPSEQ9Y251 543 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 A0A1B0GTH6 734 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 A0A1W2PQC6 194 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 RARRES1P49788 294 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 ASPHQ12797 758 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 ARL13BQ3SXY8 428 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 ZNF564Q8TBZ8 553 aaPredicted RBP12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 CPA5Q8WXQ8 436 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 MAML1Q92585 1016 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 ZMAT2Q96NC0 199 aaKnown RBP12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 RNF208Q9H0X6 261 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 MRPL46Q9H2W6 279 aaKnown RBP12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 ATP11BQ9Y2G3 1177 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 C2CD2LO14523 706 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 XPAP23025 273 aaPredicted RBP12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 SPARCL1Q14515 664 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 APPL2Q8NEU8 664 aa12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 POP1Q99575 1024 aaKnown RBP12.33□□□□□ -0.44
LDLRAP1-207ENST00000488127 SLC16A3O15427 465 aaKnown RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 MGEA5O60502 916 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 PQBP1O60828 265 aaKnown RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 SPAG7O75391 227 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 APOEP02649 317 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 MMEL1Q495T6 779 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 LRRC31Q6UY01 552 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 KCNK18Q7Z418 384 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 TRIM42Q8IWZ5 723 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 C4orf19Q8IY42 314 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ARRDC4Q8NCT1 418 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 DNAJB3Q8WWF6 145 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 XPNPEP3Q9NQH7 507 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ABCC6O95255 1503 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 EIF3DO15371 548 aaKnown RBP eCLIP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 PGK1P00558 417 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ITGB3P05106 788 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 CALB1P05937 261 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 STMN1P16949 149 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 AP3M2P53677 418 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 SATB1Q01826 763 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ZNF484Q5JVG2 852 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 RAD9BQ6WBX8 426 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 DEFB128Q7Z7B8 93 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 BBS5Q8N3I7 341 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 TNIP3Q96KP6 325 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 CHORDC1Q9UHD1 332 aaPredicted RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 RASA4BC9J798 803 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 KIAA0391O15091 583 aaKnown RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 RASA4O43374 803 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 TRAPPC3O43617 180 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 GRAP2O75791 330 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 B3GAT3O94766 335 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ORC1Q13415 861 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 VSIG10LQ86VR7 867 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 RIOX2Q8IUF8 465 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 RBBP8NLQ8NC74 664 aaPredicted RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ATP8B4Q8TF62 1192 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 CAPN11Q9UMQ6 739 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 PHF20L1A8MW92 1017 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 HNRNPCP07910 306 aaKnown RBP eCLIP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 BRAFP15056 766 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 PDE1BQ01064 536 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 SGSM1Q2NKQ1 1148 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ANKRD20A4Q4UJ75 823 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ANKRD20A8PQ5CZ79 823 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ANKRD20A2Q5SQ80 823 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 ANKRD20A1Q5TYW2 823 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 SAMD3Q8N6K7 520 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 TC2NQ8N9U0 490 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 PCSK9Q8NBP7 692 aaKnown RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 HNRNPLLQ8WVV9 542 aaKnown RBP12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 PNMA5Q96PV4 448 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 SLC40A1Q9NP59 571 aa12.32□□□□□ -0.44
LDLRAP1-207ENST00000488127 DCDC2CA8MYV0 355 aa12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 F5H423 210 aaPredicted RBP12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 EXTL3O43909 919 aa12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 USP2O75604 605 aaPredicted RBP12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 ZBED1O96006 694 aa12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 UBA1P22314 1058 aaKnown RBP12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 GRIK1P39086 918 aa12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 CXCL17Q6UXB2 119 aa12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 ENOSF1Q7L5Y1 443 aa12.31□□□□□ -0.44
LDLRAP1-207ENST00000488127 TTC1Q99614 292 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms