RNA–Protein interactions for RNA: ENST00000488121.1

COL1A2-209, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 2

Gene COL1A2, Length 380 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-209ENST00000488121 SIX4Q9UIU6 781 aa12.33□□□□□ -0.44
COL1A2-209ENST00000488121 INSL6Q9Y581 213 aa12.33□□□□□ -0.44
COL1A2-209ENST00000488121 ANO9A1A5B4 782 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 CASTOR2A6NHX0 329 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 PON1P27169 355 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 PNPLA4P41247 253 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 OR1G1P47890 313 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 CLCNKBP51801 687 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 MLLT1Q03111 559 aaPredicted RBP12.32□□□□□ -0.44
COL1A2-209ENST00000488121 LRMPQ12912 555 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 PTPN21Q16825 1174 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 SPOUT1Q5T280 376 aaKnown RBP12.32□□□□□ -0.44
COL1A2-209ENST00000488121 SCARA3Q6AZY7 606 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 DRC7Q8IY82 874 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 COLGALT2Q8IYK4 626 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 CMTR2Q8IYT2 770 aaKnown RBP12.32□□□□□ -0.44
COL1A2-209ENST00000488121 LRRC43Q8N309 656 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 NEK11Q8NG66 645 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 LMO3Q8TAP4 145 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 CXorf38Q8TB03 319 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 HPDLQ96IR7 371 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 RAD9AQ99638 391 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 PI4K2AQ9BTU6 479 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 COLEC11Q9BWP8 271 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 IMPG2Q9BZV3 1241 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 INTS2Q9H0H0 1204 aaKnown RBP12.32□□□□□ -0.44
COL1A2-209ENST00000488121 NRDE2Q9H7Z3 1164 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.32□□□□□ -0.44
COL1A2-209ENST00000488121 GCNT4Q9P109 453 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 FAN1Q9Y2M0 1017 aa12.32□□□□□ -0.44
COL1A2-209ENST00000488121 TDRD15B5MCY1 1934 aaKnown RBP12.31□□□□□ -0.44
COL1A2-209ENST00000488121 C19orf67A6NJJ6 358 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 PODXLO00592 558 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 TLL1O43897 1013 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 ZC3H11AO75152 810 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL1A2-209ENST00000488121 LRRN2O75325 713 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 BMP8BP34820 402 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 ALDH7A1P49419 539 aaKnown RBP12.31□□□□□ -0.44
COL1A2-209ENST00000488121 HTRA4P83105 476 aaPredicted RBP12.31□□□□□ -0.44
COL1A2-209ENST00000488121 DSC1Q08554 894 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 UPP1Q16831 310 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 WDR72Q3MJ13 1102 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 TRIM65Q6PJ69 517 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 TMEM130Q8N3G9 435 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 FIBCD1Q8N539 461 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 LRRC52Q8N7C0 313 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 RABGGTAQ92696 567 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 TATDN2Q93075 761 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 ZNF560Q96MR9 790 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 NT5C1BQ96P26 610 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 TMEM175Q9BSA9 504 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 NUP58Q9BVL2 599 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 LSM14BQ9BX40 385 aaKnown RBP12.31□□□□□ -0.44
COL1A2-209ENST00000488121 DNAJB4Q9UDY4 337 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 SIK3Q9Y2K2 1263 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 NUB1Q9Y5A7 615 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.31□□□□□ -0.44
COL1A2-209ENST00000488121 RALGAPA2Q2PPJ7 1873 aa12.31□□□□□ -0.44
COL1A2-209ENST00000488121 KPNA7A9QM74 516 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 NRP1O14786 923 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PPEF2O14830 753 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 TADA2AO75478 443 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 B3GAT3O94766 335 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 ASS1P00966 412 aaKnown RBP12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PAX3P23760 479 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PBX1P40424 430 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 TAF6P49848 677 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 KLK7P49862 253 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 LILRA4P59901 499 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 ZNF699Q32M78 642 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 SV2CQ496J9 727 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 KLHDC7AQ5VTJ3 777 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 SPECC1LQ69YQ0 1117 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PHLDB3Q6NSJ2 640 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 VSTM4Q8IW00 320 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 FAM81BQ96LP2 452 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PAAF1Q9BRP4 392 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 XYLT2Q9H1B5 865 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 CWH43Q9H720 699 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 UBE2TQ9NPD8 197 aaPredicted RBP12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PLCB1Q9NQ66 1216 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 AAASQ9NRG9 546 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 FAM207AQ9NSI2 230 aaPredicted RBP12.3□□□□□ -0.44
COL1A2-209ENST00000488121 CACNG4Q9UBN1 327 aa12.3□□□□□ -0.44
COL1A2-209ENST00000488121 NXF1Q9UBU9 619 aaKnown RBP12.3□□□□□ -0.44
COL1A2-209ENST00000488121 PDCD11Q14690 1871 aaKnown RBP12.29□□□□□ -0.44
COL1A2-209ENST00000488121 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.29□□□□□ -0.44
COL1A2-209ENST00000488121 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.29□□□□□ -0.44
COL1A2-209ENST00000488121 CARNS1A5YM72 827 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 STAU1O95793 577 aaKnown RBP12.29□□□□□ -0.44
COL1A2-209ENST00000488121 GALTP07902 379 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 P4HA1P13674 534 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 TRIM21P19474 475 aaKnown RBP12.29□□□□□ -0.44
COL1A2-209ENST00000488121 SLC11A1P49279 550 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 MFAP3P55082 362 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 BCAR1P56945 870 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 TNNC1P63316 161 aa12.29□□□□□ -0.44
COL1A2-209ENST00000488121 NOP14P78316 857 aaKnown RBP12.29□□□□□ -0.44
COL1A2-209ENST00000488121 APBA1Q02410 837 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms