RNA–Protein interactions for RNA: ENST00000488072.1

SHROOM1-205, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-205ENST00000488072 TNNI1P19237 187 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 RPL9P32969 192 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 NLRP12P59046 1061 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 NFIL3Q16649 462 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 ZC3H3Q8IXZ2 948 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 FAM186BQ8IYM0 893 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 CSGALNACT2Q8N6G5 542 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 MRPL43Q8N983 215 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 PARD3BQ8TEW8 1205 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 RIN2Q8WYP3 895 aaPredicted RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 DDX27Q96GQ7 796 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 BORCS6Q96GS4 357 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 UROC1Q96N76 676 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 NSUN3Q9H649 340 aaKnown RBP18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 MMRN2Q9H8L6 949 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 KIAA1586Q9HCI6 787 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 CHST7Q9NS84 486 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 DERAQ9Y315 318 aa18.54■□□□□ 0.56
SHROOM1-205ENST00000488072 TMEM189-UBE2V1I3L0A0 370 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 PSMA7O14818 248 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 KRT19P08727 400 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 POU5F1Q01860 360 aaKnown RBP18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 DLX2Q07687 328 aaPredicted RBP18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 PPP3CAQ08209 521 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 EDRF1Q3B7T1 1238 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 CCDC183Q5T5S1 534 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 LLGL2Q6P1M3 1020 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 TRAPPC11Q7Z392 1133 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 TRIML1Q8N9V2 468 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 KLHL5Q96PQ7 755 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 TSG101Q99816 390 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 LMCD1Q9NZU5 365 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 NUB1Q9Y5A7 615 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 TRANK1O15050 2925 aa18.53■□□□□ 0.56
SHROOM1-205ENST00000488072 CLASP2O75122 1294 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 VNN1O95497 513 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 CNPP09543 421 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 TMEM191BP0C7N4 346 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 GLUD2P49448 558 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 LILRA4P59901 499 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 PAK1Q13153 545 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 MYBPC2Q14324 1141 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 SMC1AQ14683 1233 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 SKIV2LQ15477 1246 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 TDRD10Q5VZ19 366 aaKnown RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 C11orf57Q6ZUT1 292 aaPredicted RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 WDR49Q8IV35 697 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 LNX1Q8TBB1 728 aaPredicted RBP18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 TMEM174Q8WUU8 243 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 FNBP1Q96RU3 617 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 TLE6Q9H808 572 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 FRMD4BQ9Y2L6 1034 aa18.52■□□□□ 0.56
SHROOM1-205ENST00000488072 SF3B1O75533 1304 aaKnown RBP eCLIP18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 CETN3O15182 167 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 TEX28O15482 410 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 HCRTO43612 131 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 GLP2RO95838 553 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 C4BPAP04003 597 aaKnown RBP18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 SPATA31D3P0C874 917 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 FGFR3P22607 806 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 PSMC2P35998 433 aaKnown RBP18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 GCLMP48507 274 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 VAMP7P51809 220 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 DSG1Q02413 1049 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 BFSP1Q12934 665 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 STIM1Q13586 685 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 USP41Q3LFD5 358 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 EP400NLQ6ZTU2 488 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 SPATA31D4Q6ZUB0 917 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 ANKRD36BP1Q96IX9 119 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 SUSD3Q96L08 255 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 SENP8Q96LD8 212 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 TTPALQ9BTX7 342 aa18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 SRRTQ9BXP5 876 aaKnown RBP18.51■□□□□ 0.55
SHROOM1-205ENST00000488072 XPOTO43592 962 aaKnown RBP18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 TNNC2P02585 160 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 URODP06132 367 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 EPCAMP16422 314 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 RPL13P26373 211 aaKnown RBP18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 AARSP49588 968 aaKnown RBP eCLIP18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 MYL6P60660 151 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 TFF2Q03403 129 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 LRRC63Q05C16 580 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 CLUL1Q15846 466 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 DUSP6Q16828 381 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 DUOXA2Q1HG44 320 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 HSP90AA4PQ58FG1 418 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 KIAA1841Q6NSI8 718 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 DSTYKQ6XUX3 929 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 PALB2Q86YC2 1186 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 TMEM209Q96SK2 561 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 CLSTN3Q9BQT9 956 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 APOL5Q9BWW9 433 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 NGRNQ9NPE2 291 aaKnown RBP18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 CDH22Q9UJ99 828 aa18.5■□□□□ 0.55
SHROOM1-205ENST00000488072 VWA8A3KMH1 1905 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 SCN1AP35498 2009 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 LTBRP36941 435 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 CLDN10P78369 228 aa18.49■□□□□ 0.55
SHROOM1-205ENST00000488072 FKBP3Q00688 224 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms