RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 PPM1LQ5SGD2 360 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 STXBP4Q6ZWJ1 553 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 ZNF707Q96C28 371 aaPredicted RBP25.75■■□□□ 1.71
RNF38-208ENST00000488058 ACSF2Q96CM8 615 aaPredicted RBP25.75■■□□□ 1.71
RNF38-208ENST00000488058 SAAL1Q96ER3 474 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 SUSD3Q96L08 255 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 TSPAN18Q96SJ8 248 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 FAM213AQ9BRX8 229 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 PRKD2Q9BZL6 878 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 BLZF1Q9H2G9 400 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 MAGEF1Q9HAY2 307 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 KCNH3Q9ULD8 1083 aa25.75■■□□□ 1.71
RNF38-208ENST00000488058 ADRB2P07550 413 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 CASP1P29466 404 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 SPATA1Q5VX52 437 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 CYP26C1Q6V0L0 522 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 DSTYKQ6XUX3 929 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 CEP57L1Q8IYX8 460 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 GLIS3Q8NEA6 775 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 LEO1Q8WVC0 666 aaPredicted RBP25.74■■□□□ 1.71
RNF38-208ENST00000488058 EDAQ92838 391 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 TMEM206Q9H813 350 aa25.74■■□□□ 1.71
RNF38-208ENST00000488058 CLUHO75153 1309 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 H7C4K7 107 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 PTPN21Q16825 1174 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 CTXN3Q4LDR2 81 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 CRELD2Q6UXH1 353 aaPredicted RBP25.73■■□□□ 1.71
RNF38-208ENST00000488058 OTOP3Q7RTS5 596 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 PLCD3Q8N3E9 789 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 APPL2Q8NEU8 664 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 SLC7A14Q8TBB6 771 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 C7orf25Q9BPX7 421 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 PYM1Q9BRP8 204 aaKnown RBP25.73■■□□□ 1.71
RNF38-208ENST00000488058 ASB7Q9H672 318 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 WDR6Q9NNW5 1121 aaKnown RBP25.73■■□□□ 1.71
RNF38-208ENST00000488058 LIMD1Q9UGP4 676 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 SERTAD1Q9UHV2 236 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 PCDHB8Q9UN66 801 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 POLIQ9UNA4 740 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 USTQ9Y2C2 406 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 ATP6V1DQ9Y5K8 247 aa25.73■■□□□ 1.71
RNF38-208ENST00000488058 GOLGA8IPA6NC78 632 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 GOLGA8JA6NMD2 632 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 PPEF2O14830 753 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 GBP2P32456 591 aaPredicted RBP25.72■■□□□ 1.71
RNF38-208ENST00000488058 ZXDAP98168 799 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 ZNF280DQ6N043 979 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 ARMCX5Q6P1M9 558 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 GRAMD1CQ8IYS0 662 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 ZSWIM2Q8NEG5 633 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 CBWD1Q9BRT8 395 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 PCIF1Q9H4Z3 704 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 DERAQ9Y315 318 aa25.72■■□□□ 1.71
RNF38-208ENST00000488058 TIMM13Q9Y5L4 95 aaPredicted RBP25.72■■□□□ 1.71
RNF38-208ENST00000488058 TCHHQ07283 1943 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 A0A1B0GVL5 298 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 PRR33A8MZF0 331 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 CCL16O15467 120 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 ASGR2P07307 311 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 GARTP22102 1010 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 ROR1Q01973 937 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 FAM26FQ5R3K3 315 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 UNC13DQ70J99 1090 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 ZDHHC14Q8IZN3 488 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 RHOBTB2Q9BYZ6 727 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 RAPGEFL1Q9UHV5 662 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 FBXL5Q9UKA1 691 aa25.71■■□□□ 1.71
RNF38-208ENST00000488058 IL18RAPO95256 599 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 LDHAP00338 332 aaKnown RBP25.7■■□□□ 1.7
RNF38-208ENST00000488058 HNRNPA1P09651 372 aaKnown RBP eCLIP25.7■■□□□ 1.7
RNF38-208ENST00000488058 PFKFB1P16118 471 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 CUL4BQ13620 913 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 C9orf57Q5W0N0 161 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 SLC8B1Q6J4K2 584 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 CNNM4Q6P4Q7 775 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 GET4Q7L5D6 327 aaPredicted RBP25.7■■□□□ 1.7
RNF38-208ENST00000488058 C2CD2Q9Y426 696 aa25.7■■□□□ 1.7
RNF38-208ENST00000488058 WDR27A2RRH5 827 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 M0QZQ0 153 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 XYLBO75191 536 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 ELF1P32519 619 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 YWHAHQ04917 246 aaPredicted RBP25.69■■□□□ 1.7
RNF38-208ENST00000488058 MRPL58Q14197 206 aaKnown RBP25.69■■□□□ 1.7
RNF38-208ENST00000488058 GRASPQ7Z6J2 395 aaPredicted RBP25.69■■□□□ 1.7
RNF38-208ENST00000488058 USP37Q86T82 979 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 BRSK2Q8IWQ3 736 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 EFCAB13Q8IY85 973 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 DPP3Q9NY33 737 aa25.69■■□□□ 1.7
RNF38-208ENST00000488058 RBAKQ9NYW8 714 aaPredicted RBP25.69■■□□□ 1.7
RNF38-208ENST00000488058 PRRG1O14668 218 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 EIF3DO15371 548 aaKnown RBP eCLIP25.68■■□□□ 1.7
RNF38-208ENST00000488058 CPB1P15086 417 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 CMA1P23946 247 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 POU5F1Q01860 360 aaKnown RBP25.68■■□□□ 1.7
RNF38-208ENST00000488058 TRIM67Q6ZTA4 783 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 ZNF461Q8TAF7 563 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 SORCS3Q9UPU3 1222 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 MYO10Q9HD67 2058 aa25.68■■□□□ 1.7
RNF38-208ENST00000488058 EXTL3O43909 919 aa25.67■■□□□ 1.7
RNF38-208ENST00000488058 TBC1D4O60343 1298 aa25.67■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms