RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 ZMAT2Q96NC0 199 aaKnown RBP11.88□□□□□ -0.51
HDLBP-242ENST00000488013 CYP3A43Q9HB55 503 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 CEP72Q9P209 647 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 ZMYND8Q9ULU4 1186 aaPredicted RBP11.88□□□□□ -0.51
HDLBP-242ENST00000488013 INPP5FQ9Y2H2 1132 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 SLC4A7Q9Y6M7 1214 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 MYH11P35749 1972 aa11.88□□□□□ -0.51
HDLBP-242ENST00000488013 ANO9A1A5B4 782 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 ZBBXA8MT70 800 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 PIRO00625 290 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 MEFVO15553 781 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 AP5Z1O43299 807 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 TRAPPC3O43617 180 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 ALDH2P05091 517 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 ITGB3P05106 788 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 ACRP10323 421 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 UCHL3P15374 230 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 POLR2BP30876 1174 aaKnown RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 TAF6P49848 677 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 WNT7BP56706 349 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 KCNMA1Q12791 1236 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 SV2CQ496J9 727 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 ZNF667Q5HYK9 610 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 GLRA4Q5JXX5 417 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 CLLU1OSQ5K130 101 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 KLHDC7AQ5VTJ3 777 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 LMBRD2Q68DH5 695 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 C16orf59Q7L2K0 433 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 DPH6Q7L8W6 267 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 OTOP2Q7RTS6 562 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 CMTR2Q8IYT2 770 aaKnown RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 LMO3Q8TAP4 145 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 SPATA18Q8TC71 538 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 HELQQ8TDG4 1101 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 SYN2Q92777 582 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 YME1L1Q96TA2 773 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 CRACR2AQ9BSW2 395 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 COLEC11Q9BWP8 271 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 LSM14BQ9BX40 385 aaKnown RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 STK33Q9BYT3 514 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 NIF3L1Q9GZT8 377 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 AAASQ9NRG9 546 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 FAM207AQ9NSI2 230 aaPredicted RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 TBC1D13Q9NVG8 400 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 AGAP1Q9UPQ3 857 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 LUC7L2Q9Y383 392 aaKnown RBP11.87□□□□□ -0.51
HDLBP-242ENST00000488013 INSL6Q9Y581 213 aa11.87□□□□□ -0.51
HDLBP-242ENST00000488013 PTPRJQ12913 1337 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 SIP14410 1827 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 TBKBP1A7MCY6 615 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 MEIS3P2A8K0S8 358 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 TMEM189-UBE2V1I3L0A0 370 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 PODXLO00592 558 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ATMINO43313 823 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 CLSTN1O94985 981 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 POMCP01189 267 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 FGFR1P11362 822 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 SYN1P17600 705 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 SLC9A1P19634 815 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 IBSPP21815 317 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 RGS19P49795 217 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 TNNC1P63316 161 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 NOP14P78316 857 aaKnown RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ZBED6P86452 979 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 DSC1Q08554 894 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ELAVL2Q12926 359 aaKnown RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ASTLQ6HA08 431 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 TMC6Q7Z403 805 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 CASD1Q96PB1 797 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 SPAG5Q96R06 1193 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ZBED2Q9BTP6 218 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 ZNHIT6Q9NWK9 470 aaKnown RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 GDAP2Q9NXN4 497 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 SIX4Q9UIU6 781 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 DSEQ9UL01 958 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 CAPN11Q9UMQ6 739 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 NUB1Q9Y5A7 615 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 TRIP12Q14669 1992 aaPredicted RBP11.86□□□□□ -0.51
HDLBP-242ENST00000488013 DNAH12Q6ZR08 3092 aa11.86□□□□□ -0.51
HDLBP-242ENST00000488013 KPNA7A9QM74 516 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 AKR1B15C9JRZ8 316 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 B3GAT3O94766 335 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 UPP2O95045 317 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 GJB5O95377 273 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 VNN1O95497 513 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 CST3P01034 146 aaPredicted RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 ATP2A2P16615 1042 aaKnown RBP11.85□□□□□ -0.51
HDLBP-242ENST00000488013 LAG3P18627 525 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 BPIFB4P59827 614 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 MYL6P60660 151 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 CUL2Q13617 745 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 NAB2Q15742 525 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 UPP1Q16831 310 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 TCTN1Q2MV58 587 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 WDR72Q3MJ13 1102 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 COLGALT2Q8IYK4 626 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 PPM1KQ8N3J5 372 aa11.85□□□□□ -0.51
HDLBP-242ENST00000488013 TOP6BLQ8N6T0 577 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms