RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 CNGA1P29973 690 aa5.82□□□□□ -1.48
SMC4-219ENST00000487747 TARDBPQ13148 414 aaKnown RBP eCLIP5.82□□□□□ -1.48
SMC4-219ENST00000487747 DACT2Q5SW24 774 aa5.82□□□□□ -1.48
SMC4-219ENST00000487747 KRT26Q7Z3Y9 468 aa5.82□□□□□ -1.48
SMC4-219ENST00000487747 C7orf25Q9BPX7 421 aa5.82□□□□□ -1.48
SMC4-219ENST00000487747 C11orf54Q9H0W9 315 aaPredicted RBP5.82□□□□□ -1.48
SMC4-219ENST00000487747 USP35Q9P2H5 1018 aa5.82□□□□□ -1.48
SMC4-219ENST00000487747 PCDHA13Q9Y5I0 950 aa5.82□□□□□ -1.48
SMC4-219ENST00000487747 TRGV11A0A075B6L2 103 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 INO80B-WBP1J3KQ70 363 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 CTXN1P60606 82 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 NHLH1Q02575 133 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 FLYWCH1Q4VC44 716 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 TSHZ1Q6ZSZ6 1077 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 GLCCI1Q86VQ1 547 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 COLGALT2Q8IYK4 626 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 NELL1Q92832 810 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 INO80BQ9C086 356 aaPredicted RBP5.81□□□□□ -1.48
SMC4-219ENST00000487747 MANSC1Q9H8J5 431 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 TUBD1Q9UJT1 453 aa5.81□□□□□ -1.48
SMC4-219ENST00000487747 PHLDB1Q86UU1 1377 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 COL3A1P02461 1466 aaPredicted RBP5.8□□□□□ -1.48
SMC4-219ENST00000487747 K7ESF4 209 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 AGFG2O95081 481 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 ELFN1P0C7U0 828 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 GATA3P23771 443 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 CREMQ03060 361 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 FOXF2Q12947 444 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 KLF1Q13351 362 aaPredicted RBP5.8□□□□□ -1.48
SMC4-219ENST00000487747 RNF219Q5W0B1 726 aaPredicted RBP5.8□□□□□ -1.48
SMC4-219ENST00000487747 NSUN7Q8NE18 718 aaKnown RBP5.8□□□□□ -1.48
SMC4-219ENST00000487747 TMEM125Q96AQ2 219 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 LRIG1Q96JA1 1093 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 MED15Q96RN5 788 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 DMTF1Q9Y222 760 aa5.8□□□□□ -1.48
SMC4-219ENST00000487747 TMA7Q9Y2S6 64 aaKnown RBP5.8□□□□□ -1.48
SMC4-219ENST00000487747 WASHC2AQ641Q2 1341 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 GRM6O15303 877 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 YY2O15391 372 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 PEX1O43933 1283 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 FOLR3P41439 243 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 PROK1P58294 105 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 CD300EQ496F6 205 aaPredicted RBP5.79□□□□□ -1.48
SMC4-219ENST00000487747 UTP14CQ5TAP6 766 aaKnown RBP5.79□□□□□ -1.48
SMC4-219ENST00000487747 KIAA0895LQ68EN5 471 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 VWA1Q6PCB0 445 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 CBARPQ8N350 705 aaPredicted RBP5.79□□□□□ -1.48
SMC4-219ENST00000487747 ATL2Q8NHH9 583 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 SLC30A5Q8TAD4 765 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 IFI44Q8TCB0 444 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 LPIN2Q92539 896 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 JADE3Q92613 823 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 CTTNBP2NLQ9P2B4 639 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 SLC45A2Q9UMX9 530 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 CDYLQ9Y232 598 aa5.79□□□□□ -1.48
SMC4-219ENST00000487747 HAUS5O94927 633 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 CPEP16870 476 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 IARSP41252 1262 aaKnown RBP5.78□□□□□ -1.48
SMC4-219ENST00000487747 WASP42768 502 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 MAPK10P53779 464 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 ZNF280AP59817 542 aaPredicted RBP5.78□□□□□ -1.48
SMC4-219ENST00000487747 CLUL1Q15846 466 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 INAVAQ3KP66 663 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 SH2D3CQ8N5H7 860 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 CNTD1Q8N815 330 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 TFAP2BQ92481 460 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 TMX3Q96JJ7 454 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 KLHL32Q96NJ5 620 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 SLC17A6Q9P2U8 582 aa5.78□□□□□ -1.48
SMC4-219ENST00000487747 ARPP21Q9UBL0 812 aaPredicted RBP5.78□□□□□ -1.48
SMC4-219ENST00000487747 A0A1W2PS29 197 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 TRIM75PA6NK02 468 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 CGB1A6NKQ9 187 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 NDUFS2O75306 463 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 C5AR1P21730 350 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 KRTAP10-11P60412 298 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 MC2RQ01718 297 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 IL10RAQ13651 578 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 PAPD7Q5XG87 772 aaKnown RBP5.77□□□□□ -1.49
SMC4-219ENST00000487747 PEG10Q86TG7 708 aaKnown RBP5.77□□□□□ -1.49
SMC4-219ENST00000487747 SRRM1Q8IYB3 904 aaKnown RBP5.77□□□□□ -1.49
SMC4-219ENST00000487747 NLGN4YQ8NFZ3 816 aaPredicted RBP5.77□□□□□ -1.49
SMC4-219ENST00000487747 TDP1Q9NUW8 608 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 LIMCH1Q9UPQ0 1083 aa5.77□□□□□ -1.49
SMC4-219ENST00000487747 PRAMEF33A0A0G2JMD5 474 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PCDHGA12O60330 932 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PRAMEF10O60809 474 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 SUN1O94901 812 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 SRGNP10124 158 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 KCNA2P16389 499 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 EDNRBP24530 442 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 AKNAD1Q5T1N1 836 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 KAZNQ674X7 775 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PGM2L1Q6PCE3 622 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 AMOTL1Q8IY63 956 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMC4-219ENST00000487747 TMIEQ8NEW7 156 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 FBXO41Q8TF61 875 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 IPPQ9Y573 584 aa5.76□□□□□ -1.49
SMC4-219ENST00000487747 PCDHGA9Q9Y5G4 932 aaKnown RBP5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms