RNA–Protein interactions for RNA: ENST00000487617.5

HDAC4-209, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 819 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-209ENST00000487617 C8AP07357 584 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 NFICP08651 508 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 TMEM132DQ14C87 1099 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 PPM1LQ5SGD2 360 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 SPATA1Q5VX52 437 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 MAGEF1Q9HAY2 307 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 LIMD1Q9UGP4 676 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 CLUHO75153 1309 aa22.19■■□□□ 1.14
HDAC4-209ENST00000487617 VWA8A3KMH1 1905 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 STXBP4Q6ZWJ1 553 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 APPL2Q8NEU8 664 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 SLC7A14Q8TBB6 771 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 HPS3Q969F9 1004 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 ASB7Q9H672 318 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 TMEM206Q9H813 350 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 PCDHB8Q9UN66 801 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 DERAQ9Y315 318 aa22.18■■□□□ 1.14
HDAC4-209ENST00000487617 HNRNPA1P09651 372 aaKnown RBP eCLIP22.17■■□□□ 1.14
HDAC4-209ENST00000487617 ARPP19P56211 112 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 KRT85P78386 507 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 POU5F1Q01860 360 aaKnown RBP22.17■■□□□ 1.14
HDAC4-209ENST00000487617 MRPL58Q14197 206 aaKnown RBP22.17■■□□□ 1.14
HDAC4-209ENST00000487617 CTXN3Q4LDR2 81 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 SLC8B1Q6J4K2 584 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 CNNM4Q6P4Q7 775 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 CRELD2Q6UXH1 353 aaPredicted RBP22.17■■□□□ 1.14
HDAC4-209ENST00000487617 TRIM67Q6ZTA4 783 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 CHAMP1Q96JM3 812 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 SPATA32Q96LK8 384 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 C7orf25Q9BPX7 421 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 PYM1Q9BRP8 204 aaKnown RBP22.17■■□□□ 1.14
HDAC4-209ENST00000487617 FAM213AQ9BRX8 229 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 RAPGEFL1Q9UHV5 662 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 KCNH3Q9ULD8 1083 aa22.17■■□□□ 1.14
HDAC4-209ENST00000487617 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.16■■□□□ 1.14
HDAC4-209ENST00000487617 TULP1O00294 542 aaPredicted RBP22.16■■□□□ 1.14
HDAC4-209ENST00000487617 TBC1D4O60343 1298 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 ASGR2P07307 311 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 GARTP22102 1010 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 GBP2P32456 591 aaPredicted RBP22.16■■□□□ 1.14
HDAC4-209ENST00000487617 ROR1Q01973 937 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 BECN1Q14457 450 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 ZNF280DQ6N043 979 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 DSTYKQ6XUX3 929 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 GLIS3Q8NEA6 775 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 LEO1Q8WVC0 666 aaPredicted RBP22.16■■□□□ 1.14
HDAC4-209ENST00000487617 SAAL1Q96ER3 474 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 BLZF1Q9H2G9 400 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 FBXL5Q9UKA1 691 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 SORCS3Q9UPU3 1222 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 C2CD2Q9Y426 696 aa22.16■■□□□ 1.14
HDAC4-209ENST00000487617 M0QZQ0 153 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 PPEF2O14830 753 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 CCL16O15467 120 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 XYLBO75191 536 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 IL18RAPO95256 599 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 LDHAP00338 332 aaKnown RBP22.15■■□□□ 1.14
HDAC4-209ENST00000487617 HOXA9P31269 272 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 AFMP43652 599 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 AARSP49588 968 aaKnown RBP eCLIP22.15■■□□□ 1.14
HDAC4-209ENST00000487617 UVSSAQ2YD98 709 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 FAM26FQ5R3K3 315 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 C9orf57Q5W0N0 161 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 CEP57L1Q8IYX8 460 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 ZNF461Q8TAF7 563 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 POLIQ9UNA4 740 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 ATP6V1DQ9Y5K8 247 aa22.15■■□□□ 1.14
HDAC4-209ENST00000487617 TIMM13Q9Y5L4 95 aaPredicted RBP22.15■■□□□ 1.14
HDAC4-209ENST00000487617 PDCD11Q14690 1871 aaKnown RBP22.14■■□□□ 1.13
HDAC4-209ENST00000487617 TMEM221A6NGB7 291 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 M0R296 226 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 N4BP1O75113 896 aaKnown RBP22.14■■□□□ 1.13
HDAC4-209ENST00000487617 CASP1P29466 404 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 ELF1P32519 619 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 YWHAHQ04917 246 aaPredicted RBP22.14■■□□□ 1.13
HDAC4-209ENST00000487617 SIGLEC14Q08ET2 396 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 MTMR3Q13615 1198 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 ARMCX5Q6P1M9 558 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 HFE2Q6ZVN8 426 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 UNC13DQ70J99 1090 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 RTL10Q7L3V2 364 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 GRASPQ7Z6J2 395 aaPredicted RBP22.14■■□□□ 1.13
HDAC4-209ENST00000487617 USP37Q86T82 979 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 ZSWIM2Q8NEG5 633 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 NOC3LQ8WTT2 800 aaKnown RBP22.14■■□□□ 1.13
HDAC4-209ENST00000487617 CBWD1Q9BRT8 395 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 PCIF1Q9H4Z3 704 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 SERTAD1Q9UHV2 236 aa22.14■■□□□ 1.13
HDAC4-209ENST00000487617 C2orf16Q68DN1 1984 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 WDR27A2RRH5 827 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 GOLGA8IPA6NC78 632 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 GOLGA8JA6NMD2 632 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 ABLIM3O94929 683 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 LILRA4P59901 499 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 GET4Q7L5D6 327 aaPredicted RBP22.13■■□□□ 1.13
HDAC4-209ENST00000487617 BRSK2Q8IWQ3 736 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 EFCAB13Q8IY85 973 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 MYADMQ96S97 322 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 DPP3Q9NY33 737 aa22.13■■□□□ 1.13
HDAC4-209ENST00000487617 HCN4Q9Y3Q4 1203 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms