RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PRR23CQ6ZRP0 262 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 TAS1R3Q7RTX0 852 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 TMEM130Q8N3G9 435 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 DEPTORQ8TB45 409 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 IRF7Q92985 503 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 CDT1Q9H211 546 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 CYP4F11Q9HBI6 524 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 LAMA1P25391 3075 aa16.87■□□□□ 0.29
MCF2L-228ENST00000487354 CHURC1-FNTBB4DL54 471 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 PRRG1O14668 218 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 SYN3O14994 580 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 TRAPPC3O43617 180 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 PAPSS2O95340 614 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-228ENST00000487354 GRM5P41594 1212 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 FNTBP49356 437 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 PTGDRQ13258 359 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 CSRP2Q16527 193 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 TMEM132AQ24JP5 1023 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 PRR23BQ6ZRT6 265 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 Q6ZS52 159 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 PDZD4Q76G19 769 aaPredicted RBP16.86■□□□□ 0.29
MCF2L-228ENST00000487354 DIS3L2Q8IYB7 885 aaKnown RBP16.86■□□□□ 0.29
MCF2L-228ENST00000487354 NACC1Q96RE7 527 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 LRRC3Q9BY71 257 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 RBM12Q9NTZ6 932 aaKnown RBP16.86■□□□□ 0.29
MCF2L-228ENST00000487354 TNFSF13BQ9Y275 285 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 DENND4CQ5VZ89 1909 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 MYH11P35749 1972 aa16.86■□□□□ 0.29
MCF2L-228ENST00000487354 CCNE1P24864 410 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 RPA1P27694 616 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 ARPP19P56211 112 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 TMC8Q8IU68 726 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 NECAB1Q8N987 351 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 NSUN7Q8NE18 718 aaKnown RBP16.85■□□□□ 0.29
MCF2L-228ENST00000487354 SHKBP1Q8TBC3 707 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 ZSCAN18Q8TBC5 510 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-228ENST00000487354 DEPDC1BQ8WUY9 529 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 WASF1Q92558 559 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 C18orf25Q96B23 403 aaPredicted RBP16.85■□□□□ 0.29
MCF2L-228ENST00000487354 SDK1Q7Z5N4 2213 aa16.85■□□□□ 0.29
MCF2L-228ENST00000487354 KIAA1549LQ6ZVL6 1849 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 OBSL1O75147 1896 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 ARHGEF35A5YM69 484 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 ZNF197O14709 1029 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 KCNE1P15382 129 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 PROZP22891 400 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 ELF1P32519 619 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 CXCL12P48061 93 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 SOX9P48436 509 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 EFNA5P52803 228 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 MLLT6P55198 1093 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-228ENST00000487354 ST3GAL1Q11201 340 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 TWF1Q12792 350 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 SIM2Q14190 667 aaPredicted RBP16.84■□□□□ 0.29
MCF2L-228ENST00000487354 PPP2R5AQ15172 486 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 TEAD2Q15562 447 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 ME3Q16798 604 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 TPGS2Q68CL5 300 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 TXNDC11Q6PKC3 985 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 MFSD6LQ8IWD5 586 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 SPEM1Q8N4L4 309 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 BEST2Q8NFU1 509 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 GTF3C6Q969F1 213 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 SUSD3Q96L08 255 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 LRRC3BQ96PB8 259 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 ACO2Q99798 780 aaKnown RBP16.84■□□□□ 0.29
MCF2L-228ENST00000487354 MKNK1Q9BUB5 465 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 DNAJC25Q9H1X3 360 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 CRISPLD1Q9H336 500 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 BRMS1Q9HCU9 246 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 CNTN3Q9P232 1028 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 RAB23Q9ULC3 237 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 CEP295Q9C0D2 2601 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 MYO16Q9Y6X6 1858 aa16.84■□□□□ 0.29
MCF2L-228ENST00000487354 HEPACAM2A8MVW5 462 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 JAK2O60674 1132 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 MCM7P33993 719 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 FOSBP53539 338 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 OSTNP61366 133 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 FCHO2Q0JRZ9 810 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 CTXN3Q4LDR2 81 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 RNF19BQ6ZMZ0 732 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 PHLPP2Q6ZVD8 1323 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 DAW1Q8N136 415 aa16.83■□□□□ 0.28
MCF2L-228ENST00000487354 AFF4Q9UHB7 1163 aaKnown RBP16.83■□□□□ 0.28
MCF2L-228ENST00000487354 SLC38A8A6NNN8 435 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 TM4SF5O14894 197 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 ZNF263O14978 683 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 MYL4P12829 197 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 PPP2R5DQ14738 602 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 ZNF568Q3ZCX4 644 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 STXBP5Q5T5C0 1151 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 CYP4A22Q5TCH4 519 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 LONP2Q86WA8 852 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 FAM160A2Q8N612 972 aaPredicted RBP16.82■□□□□ 0.28
MCF2L-228ENST00000487354 DDX12PQ92771 950 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 SLC38A7Q9NVC3 462 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 ARHGAP28Q9P2N2 729 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 YIPF1Q9Y548 306 aa16.82■□□□□ 0.28
MCF2L-228ENST00000487354 ATG2BQ96BY7 2078 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms