RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 FXR2P51116 673 aaKnown RBP eCLIP21.29■■□□□ 1
SMPDL3A-202ENST00000487215 CYP4A22Q5TCH4 519 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 DAW1Q8N136 415 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 FAM3CQ92520 227 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 SMARCD2Q92925 531 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 SUSD3Q96L08 255 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 ACAP3Q96P50 834 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 IER2Q9BTL4 223 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 TMEM134Q9H6X4 195 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 TRPV5Q9NQA5 729 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 ARHGAP28Q9P2N2 729 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 GMEB2Q9UKD1 530 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 PIAS3Q9Y6X2 628 aa21.29■■□□□ 1
SMPDL3A-202ENST00000487215 MCF2P10911 925 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 PROZP22891 400 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 RPL9P32969 192 aaKnown RBP21.28■■□□□ 1
SMPDL3A-202ENST00000487215 NEK4P51957 841 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 TWF1Q12792 350 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 IQCEQ6IPM2 695 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 ZNF280DQ6N043 979 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 MAMSTRQ6ZN01 415 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 ELMOD1Q8N336 334 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 C4orf32Q8N8J7 132 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 C8orf76Q96K31 380 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 FOXP1Q9H334 677 aaPredicted RBP21.28■■□□□ 1
SMPDL3A-202ENST00000487215 LMAN1LQ9HAT1 526 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 CEP72Q9P209 647 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 LRWD1Q9UFC0 647 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 AFF4Q9UHB7 1163 aaKnown RBP21.28■■□□□ 1
SMPDL3A-202ENST00000487215 NCANO14594 1321 aa21.28■■□□□ 1
SMPDL3A-202ENST00000487215 HIP1RO75146 1068 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 HARSP12081 509 aaKnown RBP21.27■■□□□ 1
SMPDL3A-202ENST00000487215 GJA1P17302 382 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 MCM4P33991 863 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 VIPR2P41587 438 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 EPHA5P54756 1037 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 NRLP54845 237 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 DMP1Q13316 513 aaPredicted RBP21.27■■□□□ 1
SMPDL3A-202ENST00000487215 NBR1Q14596 966 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 LPAL2Q16609 132 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 MPZL3Q6UWV2 235 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 SNX29Q8TEQ0 813 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 DEPDC1BQ8WUY9 529 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 DDX12PQ92771 950 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 ZNF512Q96ME7 567 aaPredicted RBP21.27■■□□□ 1
SMPDL3A-202ENST00000487215 TCHPQ9BT92 498 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 KMT5AQ9NQR1 393 aa21.27■■□□□ 1
SMPDL3A-202ENST00000487215 E9PMD0 336 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 MYL4P12829 197 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 CCR3P51677 355 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 MAPK7Q13164 816 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 PPP2R5DQ14738 602 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 LEMD2Q8NC56 503 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 APPL2Q8NEU8 664 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 ZSCAN18Q8TBC5 510 aaPredicted RBP21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 TBC1D32Q96NH3 1257 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 RTKNQ9BST9 563 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 RUSC1Q9BVN2 902 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 TRPV4Q9HBA0 871 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 ASAH2Q9NR71 780 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 MAFFQ9ULX9 164 aa21.26■□□□□ 0.99
SMPDL3A-202ENST00000487215 DCDC2BA2VCK2 349 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 ZNF263O14978 683 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 CPB1P15086 417 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 TEAD2Q15562 447 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 RNF19BQ6ZMZ0 732 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 ZBTB45Q96K62 511 aaPredicted RBP21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 DRC1Q96MC2 740 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 TUBGCP4Q9UGJ1 667 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 RAB23Q9ULC3 237 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 PCDHB8Q9UN66 801 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 RBM19Q9Y4C8 960 aaKnown RBP21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 TICRRQ7Z2Z1 1910 aa21.25■□□□□ 0.99
SMPDL3A-202ENST00000487215 ARNTLO00327 626 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 CHRNB1P11230 501 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 CCNE1P24864 410 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 TRAPPC10P48553 1259 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 SATB1Q01826 763 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 SPEM2Q0P670 501 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 GAS6Q14393 721 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 PDIA5Q14554 519 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 SLC10A6Q3KNW5 377 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 SEZ6Q53EL9 994 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 LAIR1Q6GTX8 287 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 MFSD6LQ8IWD5 586 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 CELF5Q8N6W0 485 aaKnown RBP21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 IGSF22Q8N9C0 903 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 SHKBP1Q8TBC3 707 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 DNM3Q9UQ16 869 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 YIPF1Q9Y548 306 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 STK24Q9Y6E0 443 aa21.24■□□□□ 0.99
SMPDL3A-202ENST00000487215 PP2D1A8MPX8 630 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 HEPACAM2A8MVW5 462 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 SLC16A4O15374 487 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 RINT1Q6NUQ1 792 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 CCDC83Q8IWF9 413 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 TMEM130Q8N3G9 435 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 BEST2Q8NFU1 509 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 FBXO18Q8NFZ0 1043 aa21.23■□□□□ 0.99
SMPDL3A-202ENST00000487215 RSPRY1Q96DX4 576 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 181.8 ms