RNA–Protein interactions for RNA: ENST00000487054.1

LBR-207, Transcript of lamin B receptor, humanhuman

TSL 3

Gene LBR, Length 731 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LBR-207ENST00000487054 HOOK1Q9UJC3 728 aaKnown RBP11.05□□□□□ -0.64
LBR-207ENST00000487054 TNFSF13BQ9Y275 285 aa11.05□□□□□ -0.64
LBR-207ENST00000487054 SSX2IPQ9Y2D8 614 aa11.05□□□□□ -0.64
LBR-207ENST00000487054 SF3B1O75533 1304 aaKnown RBP eCLIP11.05□□□□□ -0.64
LBR-207ENST00000487054 MYMKA6NI61 221 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 GOLGA6L22H0YM25 854 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 ACTN4O43707 911 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 HARSP12081 509 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 NPR3P17342 541 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 BRCC3P46736 316 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 NDUFA8P51970 172 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 UBE2HP62256 183 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 STRN3Q13033 797 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 DHX8Q14562 1220 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 DCAF4L1Q3SXM0 396 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 ZNF568Q3ZCX4 644 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 CWF19L1Q69YN2 538 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 ZPBP2Q6X784 338 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 KRBA2Q6ZNG9 492 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 UNC13DQ70J99 1090 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 GET4Q7L5D6 327 aaPredicted RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 OTOP3Q7RTS5 596 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 MYCT1Q8N699 235 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 TMEM161BQ8NDZ6 487 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 PIK3R5Q8WYR1 880 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 CCDC47Q96A33 483 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 ACSF2Q96CM8 615 aaPredicted RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 MRPL4Q9BYD3 311 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 PANK2Q9BZ23 570 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 GTPBP4Q9BZE4 634 aaKnown RBP11.04□□□□□ -0.64
LBR-207ENST00000487054 GDPD2Q9HCC8 539 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 PTPRHQ9HD43 1115 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.04□□□□□ -0.64
LBR-207ENST00000487054 FBXW11Q9UKB1 542 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 ANK1P16157 1881 aa11.04□□□□□ -0.64
LBR-207ENST00000487054 SMIM28A0A1B0GU29 152 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 H0Y858 1186 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 STK25O00506 426 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 PI15O43692 258 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 ZMYND10O75800 440 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 ZNF202O95125 648 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 PAPLNO95428 1278 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 PROZP22891 400 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 TKTP29401 623 aaKnown RBP11.03□□□□□ -0.64
LBR-207ENST00000487054 PTPN5P54829 565 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 GTF2BQ00403 316 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 PSMD2Q13200 908 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 UPP1Q16831 310 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 ALKAL1Q6UXT8 129 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 DYMQ7RTS9 669 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 HAUS6Q7Z4H7 955 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 GRASPQ7Z6J2 395 aaPredicted RBP11.03□□□□□ -0.64
LBR-207ENST00000487054 FMR1NBQ8N0W7 255 aaPredicted RBP11.03□□□□□ -0.64
LBR-207ENST00000487054 C18orf25Q96B23 403 aaPredicted RBP11.03□□□□□ -0.64
LBR-207ENST00000487054 PRKD2Q9BZL6 878 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 HAPLN2Q9GZV7 340 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 PIDD1Q9HB75 910 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 PANK4Q9NVE7 773 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 SERTAD1Q9UHV2 236 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 UBE4BO95155 1302 aa11.03□□□□□ -0.64
LBR-207ENST00000487054 CFAP54Q96N23 3096 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 K7ENM7 598 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 EIF3DO15371 548 aaKnown RBP eCLIP11.02□□□□□ -0.65
LBR-207ENST00000487054 CCL16O15467 120 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 B3GAT3O94766 335 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 PIGRP01833 764 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 C8AP07357 584 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 CFHP08603 1231 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 IDEP14735 1019 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 FGFR3P22607 806 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 OR1D2P34982 312 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 GRM5P41594 1212 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 ASIC1P78348 528 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 TDGQ13569 410 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 KYAT1Q16773 422 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 XKR4Q5GH76 650 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.02□□□□□ -0.65
LBR-207ENST00000487054 ZNF720Q7Z2F6 126 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 MAP4K3Q8IVH8 894 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 FLCNQ8NFG4 579 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 ENGASEQ8NFI3 743 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 HDAC7Q8WUI4 952 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
LBR-207ENST00000487054 PAGE5Q96GU1 130 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 CHAMP1Q96JM3 812 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 SNX27Q96L92 541 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 FIZ1Q96SL8 496 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 RPP25Q9BUL9 199 aaKnown RBP11.02□□□□□ -0.65
LBR-207ENST00000487054 PLEKHA4Q9H4M7 779 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 TMEM206Q9H813 350 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 HCFC1R1Q9NWW0 138 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 ZDHHC7Q9NXF8 308 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 ANKFY1Q9P2R3 1169 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 EPS15L1Q9UBC2 864 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 EXOC7Q9UPT5 735 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.02□□□□□ -0.65
LBR-207ENST00000487054 CDY1Q9Y6F8 540 aa11.02□□□□□ -0.65
LBR-207ENST00000487054 KRBA1A5PL33 1030 aa11.01□□□□□ -0.65
LBR-207ENST00000487054 TMEM189-UBE2V1I3L0A0 370 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms