RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 DTWD2Q8NBA8 298 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 LARP4BQ92615 738 aaKnown RBP26.74■■□□□ 1.87
LIME1-206ENST00000487026 KXD1Q9BQD3 176 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 SLC2A4RGQ9NR83 387 aa26.74■■□□□ 1.87
LIME1-206ENST00000487026 ARHGEF37A1IGU5 675 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 GFRA3O60609 400 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 LRG1P02750 347 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 RHOP08100 348 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 ATF2P15336 505 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 DDIT3P35638 169 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 PPP2R3AQ06190 1150 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 ZBTB6Q15916 424 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 ENOX2Q16206 610 aaKnown RBP26.73■■□□□ 1.87
LIME1-206ENST00000487026 POTEHQ6S545 545 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 KCNN1Q92952 543 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 MCRS1Q96EZ8 462 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 FIZ1Q96SL8 496 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 ARHGEF3Q9NR81 526 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 KCNH3Q9ULD8 1083 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 PCDHB8Q9UN66 801 aa26.73■■□□□ 1.87
LIME1-206ENST00000487026 TIMM13Q9Y5L4 95 aaPredicted RBP26.73■■□□□ 1.87
LIME1-206ENST00000487026 PDCD11Q14690 1871 aaKnown RBP26.72■■□□□ 1.87
LIME1-206ENST00000487026 FAM189A1O60320 539 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 TBCAO75347 108 aaKnown RBP26.72■■□□□ 1.87
LIME1-206ENST00000487026 PIGRP01833 764 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 PTPN2P17706 415 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 CEBPZQ03701 1054 aaKnown RBP26.72■■□□□ 1.87
LIME1-206ENST00000487026 PTPAQ15257 358 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 ZC2HC1CQ53FD0 456 aaPredicted RBP26.72■■□□□ 1.87
LIME1-206ENST00000487026 SLC39A4Q6P5W5 647 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 MTSS1LQ765P7 747 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 TCEAL8Q8IYN2 117 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 APPL2Q8NEU8 664 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 FAM212AQ96EL1 285 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 CORO1BQ9BR76 489 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 MSTO1Q9BUK6 570 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 CCSER1Q9C0I3 900 aa26.72■■□□□ 1.87
LIME1-206ENST00000487026 RPF1Q9H9Y2 349 aaKnown RBP26.72■■□□□ 1.87
LIME1-206ENST00000487026 ANKRD63C9JTQ0 380 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 OGTO15294 1046 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 PDCP20941 246 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 LRPAP1P30533 357 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 ZNF280DQ6N043 979 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 CLIC6Q96NY7 704 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 UBQLN1Q9UMX0 589 aaKnown RBP26.71■■□□□ 1.87
LIME1-206ENST00000487026 INSL5Q9Y5Q6 135 aa26.71■■□□□ 1.87
LIME1-206ENST00000487026 A0A0B4J269 797 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 DCNP07585 359 aaKnown RBP26.7■■□□□ 1.86
LIME1-206ENST00000487026 SYT1P21579 422 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 GTF2BQ00403 316 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 ADCY1Q08828 1119 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 RESTQ13127 1097 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 ANGPT1Q15389 498 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 KYAT1Q16773 422 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 DYMQ7RTS9 669 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 FRMD5Q7Z6J6 570 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 TCEAL4Q96EI5 215 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 FOXD4L1Q9NU39 408 aa26.7■■□□□ 1.86
LIME1-206ENST00000487026 FBXO2Q9UK22 296 aaPredicted RBP26.7■■□□□ 1.86
LIME1-206ENST00000487026 TISP43B9A030 160 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 M0QZQ0 153 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 PPEF2O14830 753 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 CEBPBP17676 345 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 CYP3A5P20815 502 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 NBL1P41271 181 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 SNW1Q13573 536 aaKnown RBP26.69■■□□□ 1.86
LIME1-206ENST00000487026 TPGS2Q68CL5 300 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 RNF19BQ6ZMZ0 732 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 IKZF4Q9H2S9 585 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 MYH15Q9Y2K3 1946 aa26.69■■□□□ 1.86
LIME1-206ENST00000487026 PROB1E7EW31 1015 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 ADRB2P07550 413 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 OR4Q2P0C623 313 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 CPB1P15086 417 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 SCP2P22307 547 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 JADE1Q6IE81 842 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 PHLDB3Q6NSJ2 640 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 DSTYKQ6XUX3 929 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 ASCL5Q7RTU5 278 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 MAP4K3Q8IVH8 894 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 PLA2G2FQ9BZM2 168 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 FOXQ1Q9C009 403 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 AFF4Q9UHB7 1163 aaKnown RBP26.68■■□□□ 1.86
LIME1-206ENST00000487026 CPSF3Q9UKF6 684 aaKnown RBP26.68■■□□□ 1.86
LIME1-206ENST00000487026 SIT1Q9Y3P8 196 aa26.68■■□□□ 1.86
LIME1-206ENST00000487026 SRPRBQ9Y5M8 271 aaKnown RBP26.68■■□□□ 1.86
LIME1-206ENST00000487026 NRG2O14511 850 aaPredicted RBP26.67■■□□□ 1.86
LIME1-206ENST00000487026 ACOT2P49753 483 aa26.67■■□□□ 1.86
LIME1-206ENST00000487026 YWHAHQ04917 246 aaPredicted RBP26.67■■□□□ 1.86
LIME1-206ENST00000487026 PRSS36Q5K4E3 855 aa26.67■■□□□ 1.86
LIME1-206ENST00000487026 HS6ST3Q8IZP7 471 aa26.67■■□□□ 1.86
LIME1-206ENST00000487026 KRI1Q8N9T8 703 aaKnown RBP26.67■■□□□ 1.86
LIME1-206ENST00000487026 AVENQ9NQS1 362 aaPredicted RBP26.67■■□□□ 1.86
LIME1-206ENST00000487026 GDE1Q9NZC3 331 aa26.67■■□□□ 1.86
LIME1-206ENST00000487026 CCDC39Q9UFE4 941 aa26.67■■□□□ 1.86
LIME1-206ENST00000487026 COL4A3Q01955 1670 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 LRRN2O75325 713 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 OAZ2O95190 189 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 CCR2P41597 374 aa26.66■■□□□ 1.86
LIME1-206ENST00000487026 AARSP49588 968 aaKnown RBP eCLIP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms