RNA–Protein interactions for RNA: ENST00000486828.6

PDLIM7-207, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,904 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-207ENST00000486828 PPP1R7Q15435 360 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 PPP1R2P3Q6NXS1 205 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 LLGL2Q6P1M3 1020 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 PHLDB2Q86SQ0 1253 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 RBBP8NLQ8NC74 664 aaPredicted RBP19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 OR5B17Q8NGF7 314 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 C1orf54Q8WWF1 131 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 PGM2Q96G03 612 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 DDX27Q96GQ7 796 aaKnown RBP19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 SEMA4AQ9H3S1 761 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 NUB1Q9Y5A7 615 aa19.16■□□□□ 0.66
PDLIM7-207ENST00000486828 MAFO75444 373 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 CFHP08603 1231 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 RARGP13631 454 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 TMOD1P28289 359 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 MAN1A1P33908 653 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 C2CD6Q53TS8 623 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 ZPBP2Q6X784 338 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 CROCCP2Q86T23 111 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 PHF13Q86YI8 300 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 C11orf70Q9BRQ4 267 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 CNOT10Q9H9A5 744 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 MRPL47Q9HD33 250 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 PPANQ9NQ55 473 aaKnown RBP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 PTPRFP10586 1907 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 UMODL1Q5DID0 1318 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 TRAPPC3O43617 180 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 EPHX2P34913 555 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 KRT17Q04695 432 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 CALCOCO2Q13137 446 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 NCOA4Q13772 614 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 SYDE1Q6ZW31 735 aaPredicted RBP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 PASD1Q8IV76 773 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 C3orf20Q8ND61 904 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 TMEM109Q9BVC6 243 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 ADAM22Q9P0K1 906 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 WHRNQ9P202 907 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 PPME1Q9Y570 386 aa19.15■□□□□ 0.66
PDLIM7-207ENST00000486828 A0A087WUV0 522 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 GMNCA6NCL1 334 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 IQCA1LA6NCM1 817 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 RIPK2O43353 540 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 PSTPIP1O43586 416 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 TGFB3P10600 412 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 TCF7P36402 384 aaPredicted RBP19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 AP3M2P53677 418 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 ADCY2Q08462 1091 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 LLGL1Q15334 1064 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 PLEKHA7Q6IQ23 1121 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 BRSK2Q8IWQ3 736 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 SEPT1Q8WYJ6 367 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 SPATC1LQ9H0A9 340 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 CHST7Q9NS84 486 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 SCINQ9Y6U3 715 aa19.14■□□□□ 0.65
PDLIM7-207ENST00000486828 THAP12O43422 761 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 HARSP12081 509 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 FGFR4P22455 802 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 CDR1P51861 262 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 EFNA5P52803 228 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 C1QBPQ07021 282 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 GRM1Q13255 1194 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 MAMLD1Q13495 774 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 SNX1Q13596 522 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 SEZ6Q53EL9 994 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 METTL7BQ6UX53 244 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 NCAPG2Q86XI2 1143 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 RHOT1Q8IXI2 618 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 HERPUD2Q9BSE4 406 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 IMPG2Q9BZV3 1241 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 DCLK3Q9C098 648 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 SCN4AP35499 1836 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 ZNF132P52740 706 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 DRP2Q13474 957 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 PTK6Q13882 451 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 C6orf118Q5T5N4 469 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 MICALCLQ6ZW33 695 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 WDR49Q8IV35 697 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 UBR7Q8N806 425 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 GRK7Q8WTQ7 553 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 PRPF31Q8WWY3 499 aaKnown RBP19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 PPM1EQ8WY54 764 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 FAM167AQ96KS9 214 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 CCDC113Q9H0I3 377 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 GGA2Q9UJY4 613 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 LRRC37A2A6NM11 1700 aa19.13■□□□□ 0.65
PDLIM7-207ENST00000486828 TTLL13PA6NNM8 815 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 FAM189A1O60320 539 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 MSCO60682 206 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 ITIH2P19823 946 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 UBAP2Q5T6F2 1119 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 MMS22LQ6ZRQ5 1243 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 USP50Q70EL3 339 aaPredicted RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 TRMT10CQ7L0Y3 403 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 CNKSR2Q8WXI2 1034 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 ATG4AQ8WYN0 398 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 MRPL4Q9BYD3 311 aaKnown RBP19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 PAPPA2Q9BXP8 1791 aa19.12■□□□□ 0.65
PDLIM7-207ENST00000486828 TP73O15350 636 aa19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms