RNA–Protein interactions for RNA: ENST00000486255.1

GABRE-209, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 1 (best)

Gene GABRE, Length 6,176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-209ENST00000486255 DEPDC7Q96QD5 511 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 V9GYQ6 96 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 FAM47DPA6NHR8 397 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 SNPHO15079 494 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 FOSL2P15408 326 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 GYG1P46976 350 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 CAPZA2P47755 286 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 CSTF3Q12996 717 aaKnown RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 GPATCH4Q5T3I0 446 aaKnown RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 ANKRD40Q6AI12 368 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 TTC23LQ6PF05 361 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 THEM5Q8N1Q8 247 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 MS4A14Q96JA4 679 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 IL1RL2Q9HB29 575 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 ZFATQ9P243 1243 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 MARCOQ9UEW3 520 aaPredicted RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 STX7O15400 261 aaKnown RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 CAND2O75155 1236 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 KRT6AP02538 564 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 FTLP02792 175 aaPredicted RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 KRT6BP04259 564 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 TARSP26639 723 aaKnown RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 KRT6CP48668 564 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 ZNF667Q5HYK9 610 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 C11orf74Q86VG3 221 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 UNC5CLQ8IV45 518 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 SCFD1Q8WVM8 642 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 CACNA2D2Q9NY47 1150 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 PCSK1NQ9UHG2 260 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 AMACRQ9UHK6 382 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 MCM8Q9UJA3 840 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 ADAMTSL3P82987 1691 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 M0QYV0 167 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 HMGB3O15347 200 aaKnown RBP9.19□□□□□ -0.94
GABRE-209ENST00000486255 TLR2O60603 784 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 KCNQ4P56696 695 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 DCAF4L1Q3SXM0 396 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 SPATA4Q8NEY3 305 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 COA7Q96BR5 231 aa9.19□□□□□ -0.94
GABRE-209ENST00000486255 DFFAO00273 331 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ATP9BO43861 1147 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 FAM200BP0CF97 657 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 KCNK10P57789 538 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 UBE3CQ15386 1083 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PTGISQ16647 500 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SGSM1Q2NKQ1 1148 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ARL6IP4Q66PJ3 421 aaKnown RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 SETD3Q86TU7 594 aaPredicted RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 SIRT2Q8IXJ6 389 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 APPL2Q8NEU8 664 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 RSPH1Q8WYR4 309 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 C11orf70Q9BRQ4 267 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 KLHL4Q9C0H6 718 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 HDHD2Q9H0R4 259 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 RPAP3Q9H6T3 665 aaPredicted RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 MANSC1Q9H8J5 431 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PCMTD2Q9NV79 361 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 TOPAZ1Q8N9V7 1692 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SFI1A8K8P3 1242 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ERVV-1B6SEH8 477 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PRR29P0C7W0 189 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PSMA3P25788 255 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SERPINB9P50453 376 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 GPC3P51654 580 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ITIH4Q14624 930 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 KIZQ2M2Z5 673 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ZNF699Q32M78 642 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 P3H1Q32P28 736 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ERFEQ4G0M1 354 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ZNF394Q53GI3 561 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 LRRC31Q6UY01 552 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 EAF2Q96CJ1 260 aaPredicted RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 ZNF197O14709 1029 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 NR3C1P04150 777 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 GNA15P30679 374 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PRCPP42785 496 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SCNN1DP51172 638 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 EIF3EP60228 445 aaKnown RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 TMEM270Q6UE05 265 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 MFN1Q8IWA4 741 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 MIEF2Q96C03 454 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SGSM3Q96HU1 749 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SMAD5Q99717 465 aaKnown RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 ANTXR1Q9H6X2 564 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ETAA1Q9NY74 926 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 BFARQ9NZS9 450 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SLC9A2Q9UBY0 812 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 UBXN8O00124 270 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 AP3B1O00203 1094 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 ZCCHC18P0CG32 403 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PSMA4P25789 261 aaKnown RBP9.18□□□□□ -0.94
GABRE-209ENST00000486255 TAP1Q03518 808 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 RASGRF1Q13972 1273 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SLC27A3Q5K4L6 730 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 THEMIS2Q5TEJ8 643 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 SYDE2Q5VT97 1194 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 KLHL17Q6TDP4 642 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 RAD54LQ92698 747 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 PGBD4Q96DM1 585 aa9.18□□□□□ -0.94
GABRE-209ENST00000486255 TSPAN17Q96FV3 270 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms