RNA–Protein interactions for RNA: ENST00000485962.5

SGSM3-213, Transcript of small G protein signaling modulator 3, humanhuman

TSL 5

Gene SGSM3, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-213ENST00000485962 HOMER3Q9NSC5 361 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 RAB20Q9NX57 234 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 ASTN2O75129 1339 aaPredicted RBP13.12□□□□□ -0.31
SGSM3-213ENST00000485962 COL2A1P02458 1487 aaPredicted RBP13.12□□□□□ -0.31
SGSM3-213ENST00000485962 CLCN2P51788 898 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 STYK1Q6J9G0 422 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 CCDC50Q8IVM0 306 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 ARHGEF2Q92974 986 aaKnown RBP13.12□□□□□ -0.31
SGSM3-213ENST00000485962 FAM84AQ96KN4 292 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 TACO1Q9BSH4 297 aaKnown RBP13.12□□□□□ -0.31
SGSM3-213ENST00000485962 ZNF341Q9BYN7 854 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 LRRC19Q9H756 370 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 RAVER2Q9HCJ3 691 aaKnown RBP13.12□□□□□ -0.31
SGSM3-213ENST00000485962 MLXIPLQ9NP71 852 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 KMT5AQ9NQR1 393 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
SGSM3-213ENST00000485962 ZNF536O15090 1300 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 GHRP10912 638 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 NPTX2P47972 431 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 NCKAP1LP55160 1127 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 SOX10P56693 466 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 CNGA2Q16280 664 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 C2CD6Q53TS8 623 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 HIBCHQ6NVY1 386 aaPredicted RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TRMT10CQ7L0Y3 403 aaKnown RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 EXOC3L1Q86VI1 746 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 MCF2L2Q86YR7 1114 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 ANKRD42Q8N9B4 389 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 CNKSR1Q969H4 720 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 EPAS1Q99814 870 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TMEM109Q9BVC6 243 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TBC1D22BQ9NU19 505 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 PLA2G6O60733 806 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 IL4RP24394 825 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 CHKAP35790 457 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 PSMC5P62195 406 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 SNRPFP62306 86 aaKnown RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 NSUN2Q08J23 767 aaKnown RBP eCLIP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 ITIH4Q14624 930 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 PIGWQ7Z7B1 504 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 C12orf50Q8NA57 414 aaPredicted RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 PSPC1Q8WXF1 523 aaKnown RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 ST6GALNAC4Q9H4F1 302 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 GGT7Q9UJ14 662 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 SCAF8Q9UPN6 1271 aaKnown RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 UBIAD1Q9Y5Z9 338 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 PMM2O15305 246 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 RTN3O95197 1032 aaPredicted RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TGFB3P10600 412 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 GPC3P51654 580 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 CLNS1AP54105 237 aaKnown RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 SESN3P58005 492 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 XRCC4Q13426 336 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 USP37Q86T82 979 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 C4orf19Q8IY42 314 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TMEM161BQ8NDZ6 487 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 CPA5Q8WXQ8 436 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 AKT1S1Q96B36 256 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TAAR1Q96RJ0 339 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 ROPN1BQ9BZX4 212 aaPredicted RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 ZCWPW1Q9H0M4 648 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 ROPN1Q9HAT0 212 aaPredicted RBP13.11□□□□□ -0.31
SGSM3-213ENST00000485962 WHRNQ9P202 907 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 CTNNAL1Q9UBT7 734 aa13.11□□□□□ -0.31
SGSM3-213ENST00000485962 TMEM120BA0PK00 339 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 HNRNPDLO14979 420 aaKnown RBP13.1□□□□□ -0.31
SGSM3-213ENST00000485962 THAP12O43422 761 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 ATP9AO75110 1047 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 DNAJC8O75937 253 aaPredicted RBP13.1□□□□□ -0.31
SGSM3-213ENST00000485962 GAS8O95995 478 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 CREB1P16220 341 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 GJC1P36383 396 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 ADCY8P40145 1251 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 PTGER2P43116 358 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 DAB2IPQ5VWQ8 1189 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 SV2AQ7L0J3 742 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 NIPA1Q7RTP0 329 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 TRPM8Q7Z2W7 1104 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 TMEM174Q8WUU8 243 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 CLEC4DQ8WXI8 215 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 SNF8Q96H20 258 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 FAM118BQ9BPY3 351 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 TIPINQ9BVW5 301 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.1□□□□□ -0.31
SGSM3-213ENST00000485962 FOXO6A8MYZ6 492 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 WDR64B1ANS9 1081 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 FSCN2O14926 492 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 ATF2P15336 505 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 HMGB2P26583 209 aaKnown RBP13.1□□□□□ -0.31
SGSM3-213ENST00000485962 ITGA8P53708 1063 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 KYNUQ16719 465 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 CLEC16AQ2KHT3 1053 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 SMUG1Q53HV7 270 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 MFSD5Q6N075 450 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 LLGL2Q6P1M3 1020 aa13.1□□□□□ -0.31
SGSM3-213ENST00000485962 RSBN1LQ6PCB5 846 aaPredicted RBP13.1□□□□□ -0.31
SGSM3-213ENST00000485962 MAP4K3Q8IVH8 894 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms