RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 KIF12Q96FN5 646 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 CYP4F11Q9HBI6 524 aa28■■■□□ 2.07
HLA-F-227ENST00000485513 TNFSF9P41273 254 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 PPP2R3AQ06190 1150 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 ANGPT1Q15389 498 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 TPGS2Q68CL5 300 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 TCEAL8Q8IYN2 117 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 ZHX3Q9H4I2 956 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 PCDHB8Q9UN66 801 aa27.99■■■□□ 2.07
HLA-F-227ENST00000485513 GTF3C5Q9Y5Q8 519 aaPredicted RBP27.99■■■□□ 2.07
HLA-F-227ENST00000485513 TRAK2O60296 914 aa27.98■■■□□ 2.07
HLA-F-227ENST00000485513 PIGRP01833 764 aa27.98■■■□□ 2.07
HLA-F-227ENST00000485513 PTPN2P17706 415 aa27.98■■■□□ 2.07
HLA-F-227ENST00000485513 MARCKSP29966 332 aaPredicted RBP27.98■■■□□ 2.07
HLA-F-227ENST00000485513 LRPAP1P30533 357 aa27.98■■■□□ 2.07
HLA-F-227ENST00000485513 AVENQ9NQS1 362 aaPredicted RBP27.98■■■□□ 2.07
HLA-F-227ENST00000485513 UBQLN1Q9UMX0 589 aaKnown RBP27.98■■■□□ 2.07
HLA-F-227ENST00000485513 LACTBL1A8MY62 500 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 OGTO15294 1046 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 TBCAO75347 108 aaKnown RBP27.97■■■□□ 2.07
HLA-F-227ENST00000485513 SEC24AO95486 1093 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 PDCP20941 246 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 ZBTB6Q15916 424 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 SLC5A9Q2M3M2 681 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 TMEM130Q8N3G9 435 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 LARP4BQ92615 738 aaKnown RBP27.97■■■□□ 2.07
HLA-F-227ENST00000485513 KXD1Q9BQD3 176 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 CCSER1Q9C0I3 900 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 RPF1Q9H9Y2 349 aaKnown RBP27.97■■■□□ 2.07
HLA-F-227ENST00000485513 GDE1Q9NZC3 331 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 INSL5Q9Y5Q6 135 aa27.97■■■□□ 2.07
HLA-F-227ENST00000485513 XPOTO43592 962 aaKnown RBP27.96■■■□□ 2.07
HLA-F-227ENST00000485513 FAM189A1O60320 539 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 CYP3A5P20815 502 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 ENOX2Q16206 610 aaKnown RBP27.96■■■□□ 2.07
HLA-F-227ENST00000485513 ZBTB41Q5SVQ8 909 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 FRMD5Q7Z6J6 570 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 MCRS1Q96EZ8 462 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 SHDQ96IW2 340 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 CORO1BQ9BR76 489 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 SIT1Q9Y3P8 196 aa27.96■■■□□ 2.07
HLA-F-227ENST00000485513 A0A0B4J269 797 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 M0QZQ0 153 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 ABCD1P33897 745 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 ASCL5Q7RTU5 278 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 TSPAN18Q96SJ8 248 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 MSTO1Q9BUK6 570 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 AFF4Q9UHB7 1163 aaKnown RBP27.95■■■□□ 2.06
HLA-F-227ENST00000485513 MAFFQ9ULX9 164 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 CLIC4Q9Y696 253 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 MYO15AQ9UKN7 3530 aa27.95■■■□□ 2.06
HLA-F-227ENST00000485513 DCNP07585 359 aaKnown RBP27.94■■■□□ 2.06
HLA-F-227ENST00000485513 CPB1P15086 417 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 CEBPBP17676 345 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 DDIT3P35638 169 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 STARD6P59095 220 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 YWHAHQ04917 246 aaPredicted RBP27.94■■■□□ 2.06
HLA-F-227ENST00000485513 ADCY1Q08828 1119 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 SPECC1Q5M775 1068 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 EPSTI1Q96J88 318 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 FIZ1Q96SL8 496 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 VPS13AQ96RL7 3174 aa27.94■■■□□ 2.06
HLA-F-227ENST00000485513 PRR23AA6NEV1 266 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 ADRB2P07550 413 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 NMT1P30419 496 aaKnown RBP27.93■■■□□ 2.06
HLA-F-227ENST00000485513 AARSP49588 968 aaKnown RBP eCLIP27.93■■■□□ 2.06
HLA-F-227ENST00000485513 GUCY2FP51841 1108 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 GTF2BQ00403 316 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 PFKPQ01813 784 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 SNW1Q13573 536 aaKnown RBP27.93■■■□□ 2.06
HLA-F-227ENST00000485513 SLC39A4Q6P5W5 647 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 MAP4K3Q8IVH8 894 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 ELMOD1Q8N336 334 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 PJA1Q8NG27 643 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 FAM212AQ96EL1 285 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 FOXQ1Q9C009 403 aa27.93■■■□□ 2.06
HLA-F-227ENST00000485513 TIMM13Q9Y5L4 95 aaPredicted RBP27.93■■■□□ 2.06
HLA-F-227ENST00000485513 PTPRZ1P23471 2315 aaPredicted RBP27.93■■■□□ 2.06
HLA-F-227ENST00000485513 RIF1Q5UIP0 2472 aaKnown RBP27.93■■■□□ 2.06
HLA-F-227ENST00000485513 ZNF197O14709 1029 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 ECI2O75521 394 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 OAZ2O95190 189 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 PTPAQ15257 358 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 PRSS36Q5K4E3 855 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 DSTYKQ6XUX3 929 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 RNF19BQ6ZMZ0 732 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 USP49Q70CQ1 688 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 USP37Q86T82 979 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 CD302Q8IX05 232 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 KRI1Q8N9T8 703 aaKnown RBP27.92■■■□□ 2.06
HLA-F-227ENST00000485513 NKD2Q969F2 451 aaPredicted RBP27.92■■■□□ 2.06
HLA-F-227ENST00000485513 OXCT2Q9BYC2 517 aaPredicted RBP27.92■■■□□ 2.06
HLA-F-227ENST00000485513 DLGAP2Q9P1A6 1054 aa27.92■■■□□ 2.06
HLA-F-227ENST00000485513 CPSF3Q9UKF6 684 aaKnown RBP27.92■■■□□ 2.06
HLA-F-227ENST00000485513 TWF1Q12792 350 aa27.91■■■□□ 2.06
HLA-F-227ENST00000485513 MLF2Q15773 248 aaPredicted RBP27.91■■■□□ 2.06
HLA-F-227ENST00000485513 ZC2HC1CQ53FD0 456 aaPredicted RBP27.91■■■□□ 2.06
HLA-F-227ENST00000485513 SLC44A4Q53GD3 710 aa27.91■■■□□ 2.06
HLA-F-227ENST00000485513 SPATA1Q5VX52 437 aa27.91■■■□□ 2.06
HLA-F-227ENST00000485513 JADE1Q6IE81 842 aa27.91■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms