RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 PLXNA3P51805 1871 aa20.74■□□□□ 0.91
SNX17-206ENST00000484886 POU5F1Q01860 360 aaKnown RBP20.74■□□□□ 0.91
SNX17-206ENST00000484886 STK4Q13043 487 aa20.74■□□□□ 0.91
SNX17-206ENST00000484886 SPATA1Q5VX52 437 aa20.74■□□□□ 0.91
SNX17-206ENST00000484886 LNX1Q8TBB1 728 aaPredicted RBP20.74■□□□□ 0.91
SNX17-206ENST00000484886 AGPAT3Q9NRZ7 376 aa20.74■□□□□ 0.91
SNX17-206ENST00000484886 CLIC2O15247 247 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 TFAMQ00059 246 aaKnown RBP20.73■□□□□ 0.91
SNX17-206ENST00000484886 FAM160A1Q05DH4 1040 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 ITIH3Q06033 890 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 DPYDQ12882 1025 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 KNOP1Q1ED39 458 aaKnown RBP20.73■□□□□ 0.91
SNX17-206ENST00000484886 TMC5Q6UXY8 1006 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 DSTYKQ6XUX3 929 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 ANKS3Q6ZW76 656 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 S1PR5Q9H228 398 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 SFXN1Q9H9B4 322 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 DPP3Q9NY33 737 aa20.73■□□□□ 0.91
SNX17-206ENST00000484886 ZNF233A6NK53 670 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 TNFRSF10AO00220 468 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 SYN3O14994 580 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 TGM5O43548 720 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 WEE2P0C1S8 567 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 CBX2Q14781 532 aaPredicted RBP20.72■□□□□ 0.91
SNX17-206ENST00000484886 BMT2Q1RMZ1 405 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 VARS2Q5ST30 1063 aaKnown RBP20.72■□□□□ 0.91
SNX17-206ENST00000484886 EFCAB13Q8IY85 973 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 FMR1NBQ8N0W7 255 aaPredicted RBP20.72■□□□□ 0.91
SNX17-206ENST00000484886 KIAA0895Q8NCT3 520 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 APPL2Q8NEU8 664 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 SUSD3Q96L08 255 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 RIPOR3Q96MK2 946 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 CLSTN3Q9BQT9 956 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 ADAM7Q9H2U9 754 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 PRKAG3Q9UGI9 489 aa20.72■□□□□ 0.91
SNX17-206ENST00000484886 H7C4K7 107 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 PPEF2O14830 753 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 TGFB1I1O43294 461 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 OR1D2P34982 312 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 SNRPFP62306 86 aaKnown RBP20.71■□□□□ 0.91
SNX17-206ENST00000484886 C9orf57Q5W0N0 161 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 NT5DC4Q86YG4 428 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 CBWD2Q8IUF1 395 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 ADHFE1Q8IWW8 467 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 RDH13Q8NBN7 331 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 GOLGA5Q8TBA6 731 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 CACTINQ8WUQ7 758 aaKnown RBP20.71■□□□□ 0.91
SNX17-206ENST00000484886 POP1Q99575 1024 aaKnown RBP20.71■□□□□ 0.91
SNX17-206ENST00000484886 KIAA1586Q9HCI6 787 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 PDE11AQ9HCR9 933 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 CGNQ9P2M7 1197 aaKnown RBP20.71■□□□□ 0.91
SNX17-206ENST00000484886 MTRRQ9UBK8 725 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 CDH22Q9UJ99 828 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 HOOK1Q9UJC3 728 aaKnown RBP20.71■□□□□ 0.91
SNX17-206ENST00000484886 PCDHB8Q9UN66 801 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 CDY1Q9Y6F8 540 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 TTC28Q96AY4 2481 aa20.71■□□□□ 0.91
SNX17-206ENST00000484886 ADAM12O43184 909 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 KIF20AO95235 890 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 MTHFRP42898 656 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 ARPP19P56211 112 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 WNT7BP56706 349 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 ZP2Q05996 745 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 PNOCQ13519 176 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 USP37Q86T82 979 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 GJD3Q8N144 294 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 XXYLT1Q8NBI6 393 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 KREMEN2Q8NCW0 462 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 SUSD6Q92537 303 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 PLEKHA4Q9H4M7 779 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 CUL9Q8IWT3 2517 aa20.7■□□□□ 0.9
SNX17-206ENST00000484886 KINO60870 393 aaKnown RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 RHOBTB3O94955 611 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 TMEM191BP0C7N4 346 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 SNW1Q13573 536 aaKnown RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 SURF1Q15526 300 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 SNRNP35Q16560 246 aaKnown RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 CTXN3Q4LDR2 81 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 ATAT1Q5SQI0 421 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 LIN9Q5TKA1 542 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 LMBRD2Q68DH5 695 aaPredicted RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 ZNF280DQ6N043 979 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 RPGRIP1Q96KN7 1286 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 NECTIN4Q96NY8 510 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 PHF7Q9BWX1 381 aaPredicted RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 R3HCC1Q9Y3T6 440 aaKnown RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 TIMM13Q9Y5L4 95 aaPredicted RBP20.69■□□□□ 0.9
SNX17-206ENST00000484886 BACE2Q9Y5Z0 518 aa20.69■□□□□ 0.9
SNX17-206ENST00000484886 M0QZQ0 153 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 EXOC3O60645 756 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 SMC2O95347 1197 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 KRT19P08727 400 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 ODC1P11926 461 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 SP100P23497 879 aaPredicted RBP20.68■□□□□ 0.9
SNX17-206ENST00000484886 LILRA4P59901 499 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 ENGASEQ8NFI3 743 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 HDAC7Q8WUI4 952 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 ANKRD36BP1Q96IX9 119 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 ZNF560Q96MR9 790 aa20.68■□□□□ 0.9
SNX17-206ENST00000484886 FNBP1Q96RU3 617 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms