RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 RFFLQ8WZ73 363 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 TSPAN18Q96SJ8 248 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 CELF4Q9BZC1 486 aaKnown RBP28.12■■■□□ 2.09
SHOX2-204ENST00000483851 XYLT2Q9H1B5 865 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 VRTNQ9H8Y1 702 aa28.12■■■□□ 2.09
SHOX2-204ENST00000483851 RALGAPA2Q2PPJ7 1873 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 M0QZ92 97 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 BUB1O43683 1085 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 CABYRO75952 493 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 FGFR4P22455 802 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 YWHAEP62258 255 aaKnown RBP28.11■■■□□ 2.09
SHOX2-204ENST00000483851 ZNF699Q32M78 642 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 RAET1EQ8TD07 263 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 PPP1R13LQ8WUF5 828 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 SAGE1Q9NXZ1 904 aa28.11■■■□□ 2.09
SHOX2-204ENST00000483851 DDX20Q9UHI6 824 aaKnown RBP28.11■■■□□ 2.09
SHOX2-204ENST00000483851 ENC1O14682 589 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 MEFVO15553 781 aaPredicted RBP28.1■■■□□ 2.09
SHOX2-204ENST00000483851 NPTXRO95502 500 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 ASGR1P07306 291 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 NFICP08651 508 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 TMEM132DQ14C87 1099 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 FAM124BQ9H5Z6 455 aaPredicted RBP28.1■■■□□ 2.09
SHOX2-204ENST00000483851 SNX12Q9UMY4 172 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 PCDHB4Q9Y5E5 795 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 MRPS6P82932 125 aaKnown RBP28.1■■■□□ 2.09
SHOX2-204ENST00000483851 KCNA10Q16322 511 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 SERINC5Q86VE9 423 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 RHOT2Q8IXI1 618 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 C1orf127Q8N9H9 656 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 PARD6BQ9BYG5 372 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 ITGA11Q9UKX5 1188 aa28.1■■■□□ 2.09
SHOX2-204ENST00000483851 STAU1O95793 577 aaKnown RBP28.09■■■□□ 2.09
SHOX2-204ENST00000483851 MMEP08473 750 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 TCP1P17987 556 aaKnown RBP28.09■■■□□ 2.09
SHOX2-204ENST00000483851 YARSP54577 528 aaKnown RBP28.09■■■□□ 2.09
SHOX2-204ENST00000483851 HADHBP55084 474 aaKnown RBP28.09■■■□□ 2.09
SHOX2-204ENST00000483851 PPP1R2P3Q6NXS1 205 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 TRIM72Q6ZMU5 477 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 RNF180Q86T96 592 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 PALB2Q86YC2 1186 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 UBE2Q2Q8WVN8 375 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 TMEM40Q8WWA1 233 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 PCDHB18PQ96TA0 734 aa28.09■■■□□ 2.09
SHOX2-204ENST00000483851 PALMO75781 387 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 FTLP02792 175 aaPredicted RBP28.08■■■□□ 2.09
SHOX2-204ENST00000483851 ZNF132P52740 706 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 GDF6Q6KF10 455 aaPredicted RBP28.08■■■□□ 2.09
SHOX2-204ENST00000483851 SYCE1Q8N0S2 351 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 ELMO3Q96BJ8 720 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 PUF60Q9UHX1 559 aaKnown RBP28.08■■■□□ 2.09
SHOX2-204ENST00000483851 SIX4Q9UIU6 781 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 TRPV2Q9Y5S1 764 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 FKTNO75072 461 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 TFRCP02786 760 aaKnown RBP28.08■■■□□ 2.09
SHOX2-204ENST00000483851 NOP2P46087 812 aaKnown RBP28.08■■■□□ 2.09
SHOX2-204ENST00000483851 PTPN11Q06124 597 aaPredicted RBP28.08■■■□□ 2.09
SHOX2-204ENST00000483851 TAF3Q5VWG9 929 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 TMEM270Q6UE05 265 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 MSANTD4Q8NCY6 345 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 TPCN2Q8NHX9 752 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 CXorf38Q8TB03 319 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 TAS2R14Q9NYV8 317 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 HYOU1Q9Y4L1 999 aa28.08■■■□□ 2.09
SHOX2-204ENST00000483851 UMODL1Q5DID0 1318 aa28.07■■■□□ 2.08
SHOX2-204ENST00000483851 GRID2IPA4D2P6 1211 aa28.07■■■□□ 2.08
SHOX2-204ENST00000483851 TMCO5BA8MYB1 307 aa28.07■■■□□ 2.08
SHOX2-204ENST00000483851 TMCO3Q6UWJ1 677 aa28.07■■■□□ 2.08
SHOX2-204ENST00000483851 RBBP8NLQ8NC74 664 aaPredicted RBP28.07■■■□□ 2.08
SHOX2-204ENST00000483851 SLAIN1Q8ND83 568 aa28.07■■■□□ 2.08
SHOX2-204ENST00000483851 TRIM6Q9C030 488 aaPredicted RBP28.07■■■□□ 2.08
SHOX2-204ENST00000483851 ANKZF1Q9H8Y5 726 aa28.07■■■□□ 2.08
SHOX2-204ENST00000483851 PIN4Q9Y237 131 aaKnown RBP28.07■■■□□ 2.08
SHOX2-204ENST00000483851 ATP8B1O43520 1251 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 CLSTN1O94985 981 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 GPC5P78333 572 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 CKAP4Q07065 602 aaKnown RBP28.06■■■□□ 2.08
SHOX2-204ENST00000483851 ZNF667Q5HYK9 610 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 SLFN11Q7Z7L1 901 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 LRRC57Q8N9N7 239 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 RPGRIP1Q96KN7 1286 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 SNX27Q96L92 541 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 ACP6Q9NPH0 428 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 P4HA1P13674 534 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 RBP5P82980 135 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 CLEC16AQ2KHT3 1053 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 MEI1Q5TIA1 1274 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 ACAD10Q6JQN1 1059 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 KRT222Q8N1A0 295 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 TLR10Q9BXR5 811 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 EIF2AQ9BY44 585 aaKnown RBP28.06■■■□□ 2.08
SHOX2-204ENST00000483851 BCO2Q9BYV7 579 aa28.06■■■□□ 2.08
SHOX2-204ENST00000483851 ITGB3P05106 788 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 KRT19P08727 400 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 YY1P25490 414 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 ASPAP45381 313 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 FAM47CQ5HY64 1035 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 CC2D1AQ6P1N0 951 aaPredicted RBP28.05■■■□□ 2.08
SHOX2-204ENST00000483851 SLC35G2Q8TBE7 412 aa28.05■■■□□ 2.08
SHOX2-204ENST00000483851 THAP2Q9H0W7 228 aa28.05■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms