RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 COL1A2P08123 1366 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 LACTBL1A8MY62 500 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 B4GALT4O60513 344 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 TSPAN1O60635 241 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 STAG3L1P0CL83 205 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 UNGP13051 313 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 HOXA11P31270 313 aaPredicted RBP9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 RGS2P41220 211 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 GPC5P78333 572 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 SLC10A6Q3KNW5 377 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 DCAF12L1Q5VU92 463 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 PHLDB2Q86SQ0 1253 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 TRPV1Q8NER1 839 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 CXorf38Q8TB03 319 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 CPA5Q8WXQ8 436 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZBTB9Q96C00 473 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 HES6Q96HZ4 224 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZSWIM1Q9BR11 485 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMEM51Q9NW97 253 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 DMGDHQ9UI17 866 aaKnown RBP9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 SIX4Q9UIU6 781 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 PCDHB2Q9Y5E7 798 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF236Q9UL36 1845 aa9.47□□□□□ -0.89
CDC42SE1-204ENST00000483763 A0A1B0GUA9 196 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 CCDC151A5D8V7 595 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 MYADML2A6NDP7 307 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 GPR32O75388 356 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 ALDH1A1P00352 501 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 WEE2P0C1S8 567 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 MYBL2P10244 700 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 PSMC4P43686 418 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 ADAM17P78536 824 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 SLC7A5Q01650 507 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 CFAP221Q4G0U5 840 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 ZNF394Q53GI3 561 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 CCDC181Q5TID7 509 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMCO3Q6UWJ1 677 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 PASD1Q8IV76 773 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 C1orf127Q8N9H9 656 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 TMEM40Q8WWA1 233 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 ALG3Q92685 438 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 CYFIP2Q96F07 1278 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 RPGRIP1Q96KN7 1286 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 PLCD4Q9BRC7 762 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 TRIM7Q9C029 511 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 PLEKHA4Q9H4M7 779 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 CTTNBP2NLQ9P2B4 639 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 CNTN6Q9UQ52 1028 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 PCDHB4Q9Y5E5 795 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 ALG6Q9Y672 507 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 THSD7BQ9C0I4 1608 aa9.46□□□□□ -0.89
CDC42SE1-204ENST00000483763 MBLAC1A4D2B0 266 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 CLGNO14967 610 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 TREHO43280 583 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZEB2O60315 1214 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 CD58P19256 250 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 GUCY2FP51841 1108 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 ITIH3Q06033 890 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 IFI16Q16666 785 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 CLEC16AQ2KHT3 1053 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 BEND6Q5SZJ8 279 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 JADE1Q6IE81 842 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 ACAD10Q6JQN1 1059 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 FAM43BQ6ZT52 329 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 MMGT1Q8N4V1 131 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 UBR7Q8N806 425 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 RBBP8NLQ8NC74 664 aaPredicted RBP9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 SOCS4Q8WXH5 440 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 SCLT1Q96NL6 688 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 OSMRQ99650 979 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 APBA2Q99767 749 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 RPF1Q9H9Y2 349 aaKnown RBP9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 RNF19AQ9NV58 838 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 GABRQQ9UN88 632 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 NRCAMQ92823 1304 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 KAT6AQ92794 2004 aa9.46□□□□□ -0.9
CDC42SE1-204ENST00000483763 DDX3YO15523 660 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 CYP1A2P05177 515 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ASPAP45381 313 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 MARCKSL1P49006 195 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZNF132P52740 706 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 FCGRTP55899 365 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TUBB4BP68371 445 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 MFSD10Q14728 455 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 LONRF2Q1L5Z9 754 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 NAA35Q5VZE5 725 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 SCARA5Q6ZMJ2 495 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 DNAJB3Q8WWF6 145 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 KRT35Q92764 455 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 FUT8Q9BYC5 575 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 CISHQ9NSE2 258 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ARGLU1Q9NWB6 273 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 FAM53CQ9NYF3 392 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 POLIQ9UNA4 740 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 NR2E1Q9Y466 385 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 HES2Q9Y543 173 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 TRIM17Q9Y577 477 aa9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 LAMA2P24043 3122 aaKnown RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 ZSCAN5CA6NGD5 496 aaPredicted RBP9.45□□□□□ -0.9
CDC42SE1-204ENST00000483763 HAS3O00219 553 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms