RNA–Protein interactions for RNA: ENST00000483541.1

NSMCE4A-210, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE4A, Length 694 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-210ENST00000483541 FAM50AQ14320 339 aaKnown RBP4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 COLEC12Q5KU26 742 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 PGM2L1Q6PCE3 622 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 MIGA2Q7L4E1 593 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 CBARPQ8N350 705 aaPredicted RBP4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 PPM1NQ8N819 430 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 Q8NA96 180 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 PRPF38AQ8NAV1 312 aaKnown RBP4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 ZCRB1Q8TBF4 217 aaKnown RBP4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 TBC1D15Q8TC07 691 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 HDAC10Q969S8 669 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 PDLIM2Q96JY6 352 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 LRFN3Q9BTN0 628 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 ADARB2Q9NS39 739 aaKnown RBP4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 TDP1Q9NUW8 608 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 KCTD5Q9NXV2 234 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 FOXJ2Q9P0K8 574 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 LRIT1Q9P2V4 623 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 HSFX1Q9UBD0 423 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 NEU2Q9Y3R4 380 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 SPATA31A6Q5VVP1 1343 aa4.9□□□□□ -1.63
NSMCE4A-210ENST00000483541 LOC105371045A0A1W2PR82 267 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 A0A1W2PS29 197 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 CDHR4A6H8M9 788 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 KIAA0391O15091 583 aaKnown RBP4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 NDUFS2O75306 463 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 SLC16A1P53985 500 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 CACNA2D1P54289 1103 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 EVA1CP58658 441 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 KRT85P78386 507 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 NHLH1Q02575 133 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 SLFN5Q08AF3 891 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 CLUL1Q15846 466 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 PTPROQ16827 1216 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 PABPC1LQ4VXU2 614 aaKnown RBP4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 RSPH3Q86UC2 560 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 BOLLQ8N9W6 283 aaKnown RBP4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 C1orf162Q8NEQ5 155 aaPredicted RBP4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 IL17RDQ8NFM7 739 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 JADE3Q92613 823 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 SEMA4GQ9NTN9 838 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 MKS1Q9NXB0 559 aa4.89□□□□□ -1.63
NSMCE4A-210ENST00000483541 KLHL33A6NCF5 533 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 C1RP00736 705 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 SRGNP10124 158 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 FCER1AP12319 257 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 TARDBPQ13148 414 aaKnown RBP eCLIP4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 MTMR1Q13613 665 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 RAB39AQ14964 217 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 ZNF362Q5T0B9 420 aaPredicted RBP4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 KIAA0895LQ68EN5 471 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 DCBLD1Q8N8Z6 715 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 IFI44Q8TCB0 444 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 MTMR8Q96EF0 704 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 GPATCH3Q96I76 525 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 FAXDC2Q96IV6 333 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 RSAD1Q9HA92 442 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 SLC17A6Q9P2U8 582 aa4.88□□□□□ -1.63
NSMCE4A-210ENST00000483541 TRGV11A0A075B6L2 103 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 CCDC151A5D8V7 595 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 ALG1L2C9J202 215 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 GRM6O15303 877 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 PEX1O43933 1283 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 PROP1O75360 226 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 KATNA1O75449 491 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 ZFPL1O95159 310 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 IGLV2-14P01704 120 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 RPLP2P05387 115 aaKnown RBP4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 IBSPP21815 317 aaPredicted RBP4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 SLC6A4P31645 630 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 IARSP41252 1262 aaKnown RBP4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 FOLR3P41439 243 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 PTH2RP49190 550 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 ITKQ08881 620 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 GEN1Q17RS7 908 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 SYDE2Q5VT97 1194 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 PPP4R3AQ6IN85 833 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 CLNKQ7Z7G1 428 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 ACTRT2Q8TDY3 377 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 HEPHQ9BQS7 1158 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 KIAA1586Q9HCI6 787 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 INTS13Q9NVM9 706 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 JKAMPQ9P055 326 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 CALCOCO1Q9P1Z2 691 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 TUBD1Q9UJT1 453 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 TRHDEQ9UKU6 1024 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 IPPQ9Y573 584 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 MRFAP1Q9Y605 127 aa4.87□□□□□ -1.63
NSMCE4A-210ENST00000483541 PRAMEF33A0A0G2JMD5 474 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 PROM1O43490 865 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 PRAMEF10O60809 474 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 SLC43A1O75387 559 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 MT-CO1P00395 513 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 KCNA2P16389 499 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 RPS7P62081 194 aaKnown RBP4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 ZNF844Q08AG5 666 aa4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 UTP14CQ5TAP6 766 aaKnown RBP4.86□□□□□ -1.63
NSMCE4A-210ENST00000483541 LRCH2Q5VUJ6 765 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms