RNA–Protein interactions for RNA: ENST00000483442.5

LRCH3-217, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 4

Gene LRCH3, Length 562 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-217ENST00000483442 USP10Q14694 798 aaKnown RBP4.39□□□□□ -1.71
LRCH3-217ENST00000483442 AAK1Q2M2I8 961 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 LRRC24Q50LG9 513 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 CRB2Q5IJ48 1285 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 METTL24Q5JXM2 366 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 NSMFQ6X4W1 530 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 IFNL3Q8IZI9 196 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 GIMAP8Q8ND71 665 aaPredicted RBP4.39□□□□□ -1.71
LRCH3-217ENST00000483442 LINS1Q8NG48 757 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 WDR66Q8TBY9 1149 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 SOCS4Q8WXH5 440 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 DNAAF4Q8WXU2 420 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 EXTL1Q92935 676 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 ZNF503Q96F45 646 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 SGSM3Q96HU1 749 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 ADOQ96SZ5 270 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 PAGR1Q9BTK6 254 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.39□□□□□ -1.71
LRCH3-217ENST00000483442 TCF20Q9UGU0 1960 aaKnown RBP4.39□□□□□ -1.71
LRCH3-217ENST00000483442 CLSPNQ9HAW4 1339 aa4.39□□□□□ -1.71
LRCH3-217ENST00000483442 RPAP1Q9BWH6 1393 aaPredicted RBP4.39□□□□□ -1.71
LRCH3-217ENST00000483442 AK9Q5TCS8 1911 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 ESYT3A0FGR9 886 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 PQBP1O60828 265 aaKnown RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 ENTPD3O75355 529 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 PDE8BO95263 885 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 AMY2AP04746 511 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 CLTBP09497 229 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 AMY2BP19961 511 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 PRDX5P30044 214 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 HOXA7P31268 230 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 DNAJA1P31689 397 aaKnown RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 RRADP55042 308 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 HERVK_113P62684 666 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 DBPQ10586 325 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 DUSP8Q13202 625 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 TOP3AQ13472 1001 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 RRP1BQ14684 758 aaKnown RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 NAALADL2Q58DX5 795 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 MIIPQ5JXC2 388 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 PRAMEF19Q5SWL8 479 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 RNF207Q6ZRF8 634 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 C16orf59Q7L2K0 433 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 REXO1L1PQ8IX06 675 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 TRPV1Q8NER1 839 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 DPYSL5Q9BPU6 564 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 IDI2Q9BXS1 227 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 OSBPL5Q9H0X9 879 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 SLITRK6Q9H5Y7 841 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 SLC28A3Q9HAS3 691 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 DDX4Q9NQI0 724 aaKnown RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 IFT57Q9NWB7 429 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 C9orf78Q9NZ63 289 aaPredicted RBP4.38□□□□□ -1.71
LRCH3-217ENST00000483442 TMOD4Q9NZQ9 345 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 MSRAQ9UJ68 235 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 MUC3AQ02505 3323 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 MROH5Q6ZUA9 1318 aa4.38□□□□□ -1.71
LRCH3-217ENST00000483442 SLC15A5A6NIM6 579 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 PI4K2BG5E9Z4 385 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 APAF1O14727 1248 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 KIAA0355O15063 1070 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 GLRX3O76003 335 aaKnown RBP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 IFIT1P09914 478 aaKnown RBP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 BACE1P56817 501 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 NHLH1Q02575 133 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 WDR43Q15061 677 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 PRKD1Q15139 912 aaPredicted RBP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 LRRC41Q15345 812 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 NRN1LQ496H8 165 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 USP39Q53GS9 565 aaKnown RBP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 TMEM240Q5SV17 173 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 BEND3Q5T5X7 828 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 BTBD8Q5XKL5 378 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 LARP4Q71RC2 724 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 DPP9Q86TI2 863 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 SLC44A5Q8NCS7 719 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 TSR2Q969E8 191 aaKnown RBP4.37□□□□□ -1.71
LRCH3-217ENST00000483442 ZFYVE21Q9BQ24 234 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 SEMA4AQ9H3S1 761 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 AS3MTQ9HBK9 375 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 UTYO14607 1347 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 ARAP2Q8WZ64 1704 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 BDP1A6H8Y1 2624 aa4.37□□□□□ -1.71
LRCH3-217ENST00000483442 MYO9BQ13459 2157 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 TRAV20A0A0B4J274 112 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 C19orf81C9J6K1 198 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 FAM47E-STBD1D6RA91 191 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 GRM8O00222 908 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 MAN2B1O00754 1011 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 KCNK3O14649 394 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 ERC2O15083 957 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 SEPT4O43236 478 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 TIMP1P01033 207 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 CYBAP13498 195 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 MYOGP15173 224 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 CSF2RAP15509 400 aa4.36□□□□□ -1.71
LRCH3-217ENST00000483442 PTPN1P18031 435 aaKnown RBP4.36□□□□□ -1.71
LRCH3-217ENST00000483442 ACO1P21399 889 aaKnown RBP4.36□□□□□ -1.71
LRCH3-217ENST00000483442 MC4RP32245 332 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms