RNA–Protein interactions for RNA: ENST00000483407.1

CSDE1-207, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 741 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-207ENST00000483407 ADAMTS1Q9UHI8 967 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 KLF15Q9UIH9 416 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 PIN4Q9Y237 131 aaKnown RBP6.57□□□□□ -1.36
CSDE1-207ENST00000483407 IRAK3Q9Y616 596 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 C5orf42Q9H799 3197 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ZNF318Q5VUA4 2279 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 WDFY4Q6ZS81 3184 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 NID2Q14112 1375 aa6.57□□□□□ -1.36
CSDE1-207ENST00000483407 ADAMTS3O15072 1205 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 DKC1O60832 514 aaKnown RBP eCLIP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 ZNF623O75123 536 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CSDE1O75534 798 aaKnown RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 PSMD10O75832 226 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 SMNDC1O75940 238 aaKnown RBP eCLIP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 PDGFBP01127 241 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 ASGR2P07307 311 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 GALTP07902 379 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CELA3AP09093 270 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 WEE2P0C1S8 567 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CPA1P15085 419 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 IFNAR1P17181 557 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 ATF4P18848 351 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 PSMC5P62195 406 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 DRP2Q13474 957 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 GAS6Q14393 721 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 Q4G0T1 1027 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 ELMSAN1Q6PJG2 1045 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CCDC149Q6ZUS6 474 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CENPQQ7L2Z9 268 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 OTOP3Q7RTS5 596 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CATSPER4Q7RTX7 472 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 FAM35AQ86V20 835 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 RHPN2Q8IUC4 686 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 EXOC8Q8IYI6 725 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 FBXL16Q8N461 479 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 TMEM151AQ8N4L1 468 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 C12orf76Q8N812 135 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 PHC3Q8NDX5 983 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 URGCPQ8TCY9 931 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 TBCKQ8TEA7 893 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 AUTS2Q8WXX7 1259 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 SLC7A3Q8WY07 619 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 BSNDQ8WZ55 320 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 SPATA32Q96LK8 384 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 NLRP4Q96MN2 994 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 FAM193BQ96PV7 902 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 MUC3BQ9H195 1237 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 NRDE2Q9H7Z3 1164 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 SFXN1Q9H9B4 322 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CYP26B1Q9NR63 512 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 TBC1D13Q9NVG8 400 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 SUCLA2Q9P2R7 463 aaPredicted RBP6.56□□□□□ -1.36
CSDE1-207ENST00000483407 CDH22Q9UJ99 828 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 PCDHA4Q9UN74 947 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 SLC6A14Q9UN76 642 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 PKD1L2Q7Z442 2459 aa6.56□□□□□ -1.36
CSDE1-207ENST00000483407 ATG2AQ2TAZ0 1938 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CYP3A7-CYP3A51PA0A087WV96 503 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 IGKV6-21A0A0C4DH24 114 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PROB1E7EW31 1015 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CPLX1O14810 134 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 MAFO75444 373 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 OFD1O75665 1012 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 DEXIO95424 95 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 TDP2O95551 362 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 ALDH2P05091 517 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 EPCAMP16422 314 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 RPS6KB1P23443 525 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CYP3A7P24462 503 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 KLRC2P26717 231 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 ADH6P28332 368 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 HSPA4P34932 840 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 LIG3P49916 1009 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CLCN5P51795 746 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 RPS26P62854 115 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CCT2P78371 535 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 SSRP1Q08945 709 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PTPN14Q15678 1187 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 NTRK3Q16288 839 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 LONRF3Q496Y0 759 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PERM1Q5SV97 790 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CEP135Q66GS9 1140 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 GALNT17Q6IS24 598 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 CPLX2Q6PUV4 134 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 MOXD1Q6UVY6 613 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 TMC5Q6UXY8 1006 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 AGMOQ6ZNB7 445 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 C15orf39Q6ZRI6 1047 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 GPR149Q86SP6 731 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 TMEM173Q86WV6 379 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 BLIDQ8IZY5 108 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 FAM177A1Q8N128 213 aaPredicted RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 TMEM105Q8N8V8 129 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 FLCNQ8NFG4 579 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 SLC22A17Q8WUG5 538 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PSPC1Q8WXF1 523 aaKnown RBP6.55□□□□□ -1.36
CSDE1-207ENST00000483407 KCNB2Q92953 911 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 LPPQ93052 612 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 GJA10Q969M2 543 aa6.55□□□□□ -1.36
CSDE1-207ENST00000483407 PLD4Q96BZ4 506 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms