RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 LRCH2Q5VUJ6 765 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 RHOT1Q8IXI2 618 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 C7orf25Q9BPX7 421 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 C11orf54Q9H0W9 315 aaPredicted RBP4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 MANSC1Q9H8J5 431 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 ASB6Q9NWX5 421 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 USP35Q9P2H5 1018 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 INTUQ9ULD6 942 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 DMTF1Q9Y222 760 aa4.26□□□□□ -1.73
LAPTM4A-202ENST00000483117 WASHC2AQ641Q2 1341 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 SHROOM4Q9ULL8 1493 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 TRGV11A0A075B6L2 103 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 KRTAP29-1A8MX34 341 aaPredicted RBP4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 RBMXL2O75526 392 aaKnown RBP4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 SBK3P0C264 359 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 CREMQ03060 361 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 DACT2Q5SW24 774 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 KRT26Q7Z3Y9 468 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 KAT6AQ92794 2004 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 TMEM125Q96AQ2 219 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 MED15Q96RN5 788 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 TLR10Q9BXR5 811 aa4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 ZNF277Q9NRM2 450 aaPredicted RBP4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 VSX1Q9NZR4 365 aaPredicted RBP4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 TMA7Q9Y2S6 64 aaKnown RBP4.25□□□□□ -1.73
LAPTM4A-202ENST00000483117 PEX1O43933 1283 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 HAUS5O94927 633 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 CDK4P11802 303 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 POU3F3P20264 500 aaPredicted RBP4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 CTXN1P60606 82 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 NHLH1Q02575 133 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 TARDBPQ13148 414 aaKnown RBP eCLIP4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 RNF219Q5W0B1 726 aaPredicted RBP4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 ATL2Q8NHH9 583 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 TMX3Q96JJ7 454 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 SLC17A6Q9P2U8 582 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 PCDHA13Q9Y5I0 950 aa4.24□□□□□ -1.73
LAPTM4A-202ENST00000483117 INO80B-WBP1J3KQ70 363 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 GRM6O15303 877 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 YY2O15391 372 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 AGFG2O95081 481 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 VIL1P09327 827 aaKnown RBP4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 FOLR3P41439 243 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 FOXF2Q12947 444 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 KLF1Q13351 362 aaPredicted RBP4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 CLUL1Q15846 466 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 AKNAD1Q5T1N1 836 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 UTP14CQ5TAP6 766 aaKnown RBP4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 TSHZ1Q6ZSZ6 1077 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 GLCCI1Q86VQ1 547 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 AMOTL1Q8IY63 956 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 NLGN4YQ8NFZ3 816 aaPredicted RBP4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 SLC30A5Q8TAD4 765 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 HEPHQ9BQS7 1158 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 INO80BQ9C086 356 aaPredicted RBP4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 CDYLQ9Y232 598 aa4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 SETD1BQ9UPS6 1966 aaKnown RBP4.23□□□□□ -1.73
LAPTM4A-202ENST00000483117 A0A1W2PS29 197 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 K7ESF4 209 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 GATA3P23771 443 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 MAPK10P53779 464 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 PROK1P58294 105 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 ATP2B3Q16720 1220 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 CD300EQ496F6 205 aaPredicted RBP4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 FLYWCH1Q4VC44 716 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 KIAA0895LQ68EN5 471 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 VWA1Q6PCB0 445 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 PEG10Q86TG7 708 aaKnown RBP4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 RSPH3Q86UC2 560 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 NSUN7Q8NE18 718 aaKnown RBP4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 TFAP2BQ92481 460 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 LPIN2Q92539 896 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 FBXL20Q96IG2 436 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 INTS13Q9NVM9 706 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 CTTNBP2NLQ9P2B4 639 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 ARPP21Q9UBL0 812 aaPredicted RBP4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 TUBD1Q9UJT1 453 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 PHLDB1Q86UU1 1377 aa4.22□□□□□ -1.73
LAPTM4A-202ENST00000483117 PRAMEF33A0A0G2JMD5 474 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 TRIM75PA6NK02 468 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 PRAMEF10O60809 474 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 ELFN1P0C7U0 828 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 SRGNP10124 158 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 KCNA2P16389 499 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 IARSP41252 1262 aaKnown RBP4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 WASP42768 502 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 FPGSQ05932 587 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 PABPC1LQ4VXU2 614 aaKnown RBP4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 KAZNQ674X7 775 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 PGM2L1Q6PCE3 622 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 ZNF788Q6ZQV5 615 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 CLNKQ7Z7G1 428 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 SRRM1Q8IYB3 904 aaKnown RBP4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 SH2D3CQ8N5H7 860 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 CNTD1Q8N815 330 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 IFI44Q8TCB0 444 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 JADE3Q92613 823 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 UROC1Q96N76 676 aa4.21□□□□□ -1.74
LAPTM4A-202ENST00000483117 KLHL32Q96NJ5 620 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms