RNA–Protein interactions for RNA: ENST00000482996.5

VARS-225, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 728 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-225ENST00000482996 PPM1LQ5SGD2 360 aa15.07■□□□□ 0
VARS-225ENST00000482996 SPATA1Q5VX52 437 aa15.07■□□□□ 0
VARS-225ENST00000482996 JADE1Q6IE81 842 aa15.07■□□□□ 0
VARS-225ENST00000482996 CNNM4Q6P4Q7 775 aa15.07■□□□□ 0
VARS-225ENST00000482996 ZNF707Q96C28 371 aaPredicted RBP15.07■□□□□ 0
VARS-225ENST00000482996 SPATA32Q96LK8 384 aa15.07■□□□□ 0
VARS-225ENST00000482996 C7orf25Q9BPX7 421 aa15.07■□□□□ 0
VARS-225ENST00000482996 WDR6Q9NNW5 1121 aaKnown RBP15.07■□□□□ 0
VARS-225ENST00000482996 C11orf16Q9NQ32 467 aa15.07■□□□□ 0
VARS-225ENST00000482996 PCDHB8Q9UN66 801 aa15.07■□□□□ 0
VARS-225ENST00000482996 VWA8A3KMH1 1905 aa15.07■□□□□ 0
VARS-225ENST00000482996 PDCD11Q14690 1871 aaKnown RBP15.06■□□□□ 0
VARS-225ENST00000482996 MTCL1Q9Y4B5 1905 aaKnown RBP15.06■□□□□ 0
VARS-225ENST00000482996 XYLBO75191 536 aa15.06■□□□□ 0
VARS-225ENST00000482996 PRPF6O94906 941 aaKnown RBP15.06■□□□□ 0
VARS-225ENST00000482996 IL18RAPO95256 599 aa15.06■□□□□ 0
VARS-225ENST00000482996 PAPLNO95428 1278 aa15.06■□□□□ 0
VARS-225ENST00000482996 LDHAP00338 332 aaKnown RBP15.06■□□□□ 0
VARS-225ENST00000482996 C8AP07357 584 aa15.06■□□□□ 0
VARS-225ENST00000482996 COL9A1P20849 921 aa15.06■□□□□ 0
VARS-225ENST00000482996 GARTP22102 1010 aa15.06■□□□□ 0
VARS-225ENST00000482996 PAX3P23760 479 aa15.06■□□□□ 0
VARS-225ENST00000482996 ADSSP30520 456 aa15.06■□□□□ 0
VARS-225ENST00000482996 HOXA9P31269 272 aa15.06■□□□□ 0
VARS-225ENST00000482996 UVSSAQ2YD98 709 aa15.06■□□□□ 0
VARS-225ENST00000482996 CTXN3Q4LDR2 81 aa15.06■□□□□ 0
VARS-225ENST00000482996 ZNF280DQ6N043 979 aa15.06■□□□□ 0
VARS-225ENST00000482996 RTL10Q7L3V2 364 aa15.06■□□□□ 0
VARS-225ENST00000482996 CEP57L1Q8IYX8 460 aa15.06■□□□□ 0
VARS-225ENST00000482996 FEZF2Q8TBJ5 459 aa15.06■□□□□ 0
VARS-225ENST00000482996 LEO1Q8WVC0 666 aaPredicted RBP15.06■□□□□ 0
VARS-225ENST00000482996 IKZF4Q9H2S9 585 aa15.06■□□□□ 0
VARS-225ENST00000482996 KCNH3Q9ULD8 1083 aa15.06■□□□□ 0
VARS-225ENST00000482996 ZDHHC9Q9Y397 364 aa15.06■□□□□ 0
VARS-225ENST00000482996 C2CD2Q9Y426 696 aa15.06■□□□□ 0
VARS-225ENST00000482996 CLUHO75153 1309 aa15.06■□□□□ 0
VARS-225ENST00000482996 NFICP08651 508 aa15.05■□□□□ -0
VARS-225ENST00000482996 ELF1P32519 619 aa15.05■□□□□ -0
VARS-225ENST00000482996 GUCY2FP51841 1108 aa15.05■□□□□ -0
VARS-225ENST00000482996 FAM26FQ5R3K3 315 aa15.05■□□□□ -0
VARS-225ENST00000482996 SLC8B1Q6J4K2 584 aa15.05■□□□□ -0
VARS-225ENST00000482996 RSPO2Q6UXX9 243 aaPredicted RBP15.05■□□□□ -0
VARS-225ENST00000482996 DSTYKQ6XUX3 929 aa15.05■□□□□ -0
VARS-225ENST00000482996 UNC13DQ70J99 1090 aa15.05■□□□□ -0
VARS-225ENST00000482996 USP37Q86T82 979 aa15.05■□□□□ -0
VARS-225ENST00000482996 SLC7A14Q8TBB6 771 aa15.05■□□□□ -0
VARS-225ENST00000482996 FAM213AQ9BRX8 229 aa15.05■□□□□ -0
VARS-225ENST00000482996 FGFBP2Q9BYJ0 223 aa15.05■□□□□ -0
VARS-225ENST00000482996 LIMD1Q9UGP4 676 aa15.05■□□□□ -0
VARS-225ENST00000482996 ARHGEF37A1IGU5 675 aa15.04■□□□□ -0
VARS-225ENST00000482996 M0QZQ0 153 aa15.04■□□□□ -0
VARS-225ENST00000482996 TULP1O00294 542 aaPredicted RBP15.04■□□□□ -0
VARS-225ENST00000482996 KIAA0391O15091 583 aaKnown RBP15.04■□□□□ -0
VARS-225ENST00000482996 EIF3DO15371 548 aaKnown RBP eCLIP15.04■□□□□ -0
VARS-225ENST00000482996 CMA1P23946 247 aa15.04■□□□□ -0
VARS-225ENST00000482996 GBP2P32456 591 aaPredicted RBP15.04■□□□□ -0
VARS-225ENST00000482996 AFMP43652 599 aa15.04■□□□□ -0
VARS-225ENST00000482996 AARSP49588 968 aaKnown RBP eCLIP15.04■□□□□ -0
VARS-225ENST00000482996 ARPP19P56211 112 aa15.04■□□□□ -0
VARS-225ENST00000482996 ROR1Q01973 937 aa15.04■□□□□ -0
VARS-225ENST00000482996 MTMR3Q13615 1198 aa15.04■□□□□ -0
VARS-225ENST00000482996 MRPL58Q14197 206 aaKnown RBP15.04■□□□□ -0
VARS-225ENST00000482996 C9orf57Q5W0N0 161 aa15.04■□□□□ -0
VARS-225ENST00000482996 ARMCX5Q6P1M9 558 aa15.04■□□□□ -0
VARS-225ENST00000482996 CRELD2Q6UXH1 353 aaPredicted RBP15.04■□□□□ -0
VARS-225ENST00000482996 TRIM67Q6ZTA4 783 aa15.04■□□□□ -0
VARS-225ENST00000482996 NT5DC4Q86YG4 428 aa15.04■□□□□ -0
VARS-225ENST00000482996 UBALD2Q8IYN6 164 aa15.04■□□□□ -0
VARS-225ENST00000482996 ZNF461Q8TAF7 563 aa15.04■□□□□ -0
VARS-225ENST00000482996 NOC3LQ8WTT2 800 aaKnown RBP15.04■□□□□ -0
VARS-225ENST00000482996 HPS3Q969F9 1004 aa15.04■□□□□ -0
VARS-225ENST00000482996 SAAL1Q96ER3 474 aa15.04■□□□□ -0
VARS-225ENST00000482996 OXCT2Q9BYC2 517 aaPredicted RBP15.04■□□□□ -0
VARS-225ENST00000482996 SCAND2PQ9GZW5 306 aaPredicted RBP15.04■□□□□ -0
VARS-225ENST00000482996 FBXL5Q9UKA1 691 aa15.04■□□□□ -0
VARS-225ENST00000482996 SORCS3Q9UPU3 1222 aa15.04■□□□□ -0
VARS-225ENST00000482996 TECTAO75443 2155 aa15.03■□□□□ -0
VARS-225ENST00000482996 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.03■□□□□ -0
VARS-225ENST00000482996 PVALEFA0A1B0GWK0 134 aa15.03■□□□□ -0
VARS-225ENST00000482996 TMEM221A6NGB7 291 aa15.03■□□□□ -0
VARS-225ENST00000482996 M0R296 226 aa15.03■□□□□ -0
VARS-225ENST00000482996 PRRG1O14668 218 aa15.03■□□□□ -0
VARS-225ENST00000482996 CCL16O15467 120 aa15.03■□□□□ -0
VARS-225ENST00000482996 EXTL3O43909 919 aa15.03■□□□□ -0
VARS-225ENST00000482996 TBC1D4O60343 1298 aa15.03■□□□□ -0
VARS-225ENST00000482996 POU2F2P09086 479 aa15.03■□□□□ -0
VARS-225ENST00000482996 SLFN14P0C7P3 912 aa15.03■□□□□ -0
VARS-225ENST00000482996 ODC1P11926 461 aa15.03■□□□□ -0
VARS-225ENST00000482996 LILRA4P59901 499 aa15.03■□□□□ -0
VARS-225ENST00000482996 YWHAHQ04917 246 aaPredicted RBP15.03■□□□□ -0
VARS-225ENST00000482996 SIGLEC14Q08ET2 396 aa15.03■□□□□ -0
VARS-225ENST00000482996 TPGS2Q68CL5 300 aa15.03■□□□□ -0
VARS-225ENST00000482996 BRSK2Q8IWQ3 736 aa15.03■□□□□ -0
VARS-225ENST00000482996 TMEM130Q8N3G9 435 aa15.03■□□□□ -0
VARS-225ENST00000482996 CBWD1Q9BRT8 395 aa15.03■□□□□ -0
VARS-225ENST00000482996 BLZF1Q9H2G9 400 aa15.03■□□□□ -0
VARS-225ENST00000482996 DPP3Q9NY33 737 aa15.03■□□□□ -0
VARS-225ENST00000482996 RBAKQ9NYW8 714 aaPredicted RBP15.03■□□□□ -0
VARS-225ENST00000482996 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.03■□□□□ -0
VARS-225ENST00000482996 USP25Q9UHP3 1055 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms