RNA–Protein interactions for RNA: ENST00000481260.1

RAPGEF1-207, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 1,034 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-207ENST00000481260 VNN2O95498 520 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 ASGR2P07307 311 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 PDIA4P13667 645 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 RPL9P32969 192 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 MCM4P33991 863 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 ARPP19P56211 112 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 STK4Q13043 487 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 MRPL58Q14197 206 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 TMEM132DQ14C87 1099 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 POTEHQ6S545 545 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 UNC13DQ70J99 1090 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 CBWD2Q8IUF1 395 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 KIAA0895Q8NCT3 520 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 SUSD3Q96L08 255 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 TMEM209Q96SK2 561 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 FBXW11Q9UKB1 542 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 UBQLN1Q9UMX0 589 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 FAM50BQ9Y247 325 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 PCDHB13Q9Y5F0 798 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 DOCK6Q96HP0 2047 aa12.38□□□□□ -0.43
RAPGEF1-207ENST00000481260 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 FSD2A1L4K1 749 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 WDR27A2RRH5 827 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 SPDYE4A6NLX3 237 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 SEC24AO95486 1093 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 COL9A1P20849 921 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 AARSP49588 968 aaKnown RBP eCLIP12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 ROR1Q01973 937 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 ITIH3Q06033 890 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 RAB33AQ14088 237 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 KMT5BQ4FZB7 885 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 SLFN12LQ6IEE8 588 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 CES5AQ6NT32 575 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 BRSK2Q8IWQ3 736 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 CXorf38Q8TB03 319 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 ZNF507Q8TCN5 953 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 GZF1Q9H116 711 aaPredicted RBP12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 CRISPLD1Q9H336 500 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 PDE11AQ9HCR9 933 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 HCFC1R1Q9NWW0 138 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 STK39Q9UEW8 545 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 FBXL5Q9UKA1 691 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 SSX2IPQ9Y2D8 614 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 NUB1Q9Y5A7 615 aa12.37□□□□□ -0.43
RAPGEF1-207ENST00000481260 PIRO00625 290 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 HCRTO43612 131 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 EXTL3O43909 919 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 ZMYND10O75800 440 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 C8AP07357 584 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 CYP3A5P20815 502 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 SCP2P22307 547 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 MTHFRP42898 656 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 SYKP43405 635 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 CYP2J2P51589 502 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 LILRA4P59901 499 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 ELAVL2Q12926 359 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 CCDC142Q17RM4 750 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 ATAT1Q5SQI0 421 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 ARMCX5Q6P1M9 558 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 GPR65Q8IYL9 337 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 CEP57L1Q8IYX8 460 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 RDH13Q8NBN7 331 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 CMASQ8NFW8 434 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 OR5B17Q8NGF7 314 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 SLC7A14Q8TBB6 771 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 PLEKHO2Q8TD55 490 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 SMG7Q92540 1137 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 ERCC4Q92889 916 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 ELMO3Q96BJ8 720 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 BORCS6Q96GS4 357 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 MYADMQ96S97 322 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 POP1Q99575 1024 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 RTP3Q9BQQ7 232 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 AGPAT3Q9NRZ7 376 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 DPP3Q9NY33 737 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 RBAKQ9NYW8 714 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 HSPBP1Q9NZL4 362 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 LIMD1Q9UGP4 676 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 SIX4Q9UIU6 781 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 PCDHB8Q9UN66 801 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 EXOC7Q9UPT5 735 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 BACE2Q9Y5Z0 518 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 DENND4AQ7Z401 1863 aa12.36□□□□□ -0.43
RAPGEF1-207ENST00000481260 SCN1AP35498 2009 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 M0QZQ0 153 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 DCXO43602 365 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 GARTP22102 1010 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 TFAMQ00059 246 aaKnown RBP12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 AMPD3Q01432 767 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 KYAT1Q16773 422 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 CTXN3Q4LDR2 81 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 SLC8B1Q6J4K2 584 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 RNF19BQ6ZMZ0 732 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 ANKS3Q6ZW76 656 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 GRASPQ7Z6J2 395 aaPredicted RBP12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 TTC9BQ8N6N2 239 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 C1orf127Q8N9H9 656 aa12.35□□□□□ -0.43
RAPGEF1-207ENST00000481260 BEST2Q8NFU1 509 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms