RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 SNX1Q13596 522 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 FAM187AA6NFU0 413 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 SLC12A2P55011 1212 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 SOX10P56693 466 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 C12orf56Q8IXR9 622 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 ARHGAP18Q8N392 663 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 NIFKQ9BYG3 293 aaKnown RBP20.41■□□□□ 0.86
CCM2-214ENST00000481194 GTF3C4Q9UKN8 822 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 M0R2N6 131 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 THP07101 528 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 GZMAP12544 262 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 GCNT1Q02742 428 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 TMEM161BQ8NDZ6 487 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 TBC1D31Q96DN5 1066 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 INTS13Q9NVM9 706 aa20.41■□□□□ 0.86
CCM2-214ENST00000481194 HMGCRP04035 888 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 GRIK1P39086 918 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 EFHC1Q5JVL4 640 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 COPS5Q92905 334 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 MAPK8IP2Q13387 824 aaPredicted RBP20.4■□□□□ 0.86
CCM2-214ENST00000481194 RNF187Q5TA31 235 aaPredicted RBP20.4■□□□□ 0.86
CCM2-214ENST00000481194 ZBED3Q96IU2 234 aaPredicted RBP20.4■□□□□ 0.86
CCM2-214ENST00000481194 EGFRP00533 1210 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 GOLGA7BQ2TAP0 167 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 GPAT2Q6NUI2 795 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 CDKL3Q8IVW4 592 aaPredicted RBP20.4■□□□□ 0.86
CCM2-214ENST00000481194 PI4K2AQ9BTU6 479 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 NMRK2Q9NPI5 230 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 ERICH4A6NGS2 130 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 LHX1P48742 406 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 DNAJC21Q5F1R6 531 aaKnown RBP20.4■□□□□ 0.86
CCM2-214ENST00000481194 BSPRYQ5W0U4 402 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 TRIM7Q9C029 511 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 TMEM117Q9H0C3 514 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 BAZ2BQ9UIF8 2168 aaKnown RBP20.4■□□□□ 0.86
CCM2-214ENST00000481194 MYH13Q9UKX3 1938 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 WNT7AO00755 349 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 MMS22LQ6ZRQ5 1243 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 SV2AQ7L0J3 742 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 CPLX4Q7Z7G2 160 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 AFAP1L2Q8N4X5 818 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 SLC35C1Q96A29 364 aa20.4■□□□□ 0.86
CCM2-214ENST00000481194 MYH7P12883 1935 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 F8VZ95 297 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 OR1G1P47890 313 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 ELAVL2Q12926 359 aaKnown RBP20.39■□□□□ 0.86
CCM2-214ENST00000481194 EMBQ6PCB8 327 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 EFCAB13Q8IY85 973 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 PPP2R3CQ969Q6 453 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 KLC2Q9H0B6 622 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 COL20A1Q9P218 1284 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 SLC8A2Q9UPR5 921 aa20.39■□□□□ 0.86
CCM2-214ENST00000481194 CA12O43570 354 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 LCP1P13796 627 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 SYDE1Q6ZW31 735 aaPredicted RBP20.39■□□□□ 0.85
CCM2-214ENST00000481194 SNX12Q9UMY4 172 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 MRFAP1Q9Y605 127 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 ZBTB39O15060 712 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 WEE2P0C1S8 567 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 YBX3P16989 372 aaKnown RBP eCLIP20.39■□□□□ 0.854e-6■□□□□ 8.3
CCM2-214ENST00000481194 CAPN2P17655 700 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 CPA5Q8WXQ8 436 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 CFAP57Q96MR6 1250 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 AP1M1Q9BXS5 423 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 MROH7Q68CQ1 1323 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 MMP3P08254 477 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 FYB2Q5VWT5 728 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 TRAPPC12Q8WVT3 735 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 CAPNS2Q96L46 248 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 SEZ6LQ9BYH1 1024 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 RBPJLQ9UBG7 517 aa20.39■□□□□ 0.85
CCM2-214ENST00000481194 TMEM150BA6NC51 233 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 USP27XA6NNY8 438 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 DHX34Q14147 1143 aaKnown RBP20.38■□□□□ 0.85
CCM2-214ENST00000481194 HHATQ5VTY9 493 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 MAML3Q96JK9 1138 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 MAFBQ9Y5Q3 323 aaPredicted RBP20.38■□□□□ 0.85
CCM2-214ENST00000481194 LAMB2P55268 1798 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 MRPS6P82932 125 aaKnown RBP20.38■□□□□ 0.85
CCM2-214ENST00000481194 CEP85LQ5SZL2 805 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 ANO5Q75V66 913 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 CTAGE3PQ8IX95 158 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 FAM200BP0CF97 657 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 HPDP32754 393 aaPredicted RBP20.38■□□□□ 0.85
CCM2-214ENST00000481194 PPP6R3Q5H9R7 873 aaPredicted RBP20.38■□□□□ 0.85
CCM2-214ENST00000481194 SIAH1Q8IUQ4 282 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 TAS1R2Q8TE23 839 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 PLEKHA5Q9HAU0 1116 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 SOWAHBA6NEL2 793 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 PARD3BQ8TEW8 1205 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 PLEKHA4Q9H4M7 779 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 AIPL1Q9NZN9 384 aa20.38■□□□□ 0.85
CCM2-214ENST00000481194 A0A0A6YYK5 440 aaPredicted RBP20.37■□□□□ 0.85
CCM2-214ENST00000481194 CPP00450 1065 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 CXCL8P10145 99 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 NFKBIAP25963 317 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 ST6GALNAC4Q9H4F1 302 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 ASTN1O14525 1302 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 SHANK3Q9BYB0 1731 aa20.37■□□□□ 0.85
CCM2-214ENST00000481194 SMIM35A0A1B0GVV1 85 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms