RNA–Protein interactions for RNA: ENST00000481116.5

ABCF3-215, Transcript of ATP binding cassette subfamily F member 3, human

TSL 4

Gene ABCF3, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-215	ENST00000481116	CMAS	Q8NFW8	434 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	NOC3L	Q8WTT2	800 aa	Known RBP	13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	HDAC7	Q8WUI4	952 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	SUSD3	Q96L08	255 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	C7orf25	Q9BPX7	421 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	CBWD1	Q9BRT8	395 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	FAM213A	Q9BRX8	229 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	LRRC27	Q9C0I9	530 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	KCNH3	Q9ULD8	1083 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	EXOC7	Q9UPT5	735 aa		13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	TIMM13	Q9Y5L4	95 aa	Predicted RBP	13.98	□□□□□ -0.17
ABCF3-215	ENST00000481116	N4BP1	O75113	896 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	ASGR2	P07307	311 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	C8A	P07357	584 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	CYP3A5	P20815	502 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	COL9A1	P20849	921 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	HOXD13	P35453	343 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	KRT85	P78386	507 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	RAB33A	Q14088	237 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	TMEM132D	Q14C87	1099 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	POSTN	Q15063	836 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	SPATA1	Q5VX52	437 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	CCDC149	Q6ZUS6	474 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	EFCAB13	Q8IY85	973 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	TDRD5	Q8NAT2	981 aa	Known RBP	13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	BEST2	Q8NFU1	509 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	FAM84A	Q96KN4	292 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	PRKD2	Q9BZL6	878 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	SMOC2	Q9H3U7	446 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	PIDD1	Q9HB75	910 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	GDPD2	Q9HCC8	539 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	LIMD1	Q9UGP4	676 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	DPP7	Q9UHL4	492 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	BACE2	Q9Y5Z0	518 aa		13.97	□□□□□ -0.17
ABCF3-215	ENST00000481116	SYN3	O14994	580 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	CCL16	O15467	120 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	XPOT	O43592	962 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ACTN4	O43707	911 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	TBC1D4	O60343	1298 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	PFKFB1	P16118	471 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	NTHL1	P78549	312 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ZXDA	P98168	799 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ROR1	Q01973	937 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ALCAM	Q13740	583 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	MRPL58	Q14197	206 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	BECN1	Q14457	450 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	CTXN3	Q4LDR2	81 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	PPM1L	Q5SGD2	360 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	C9orf57	Q5W0N0	161 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	SCARA3	Q6AZY7	606 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	CNNM4	Q6P4Q7	775 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ELMSAN1	Q6PJG2	1045 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	UNC13D	Q70J99	1090 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	CD302	Q8IX05	232 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	SLC7A14	Q8TBB6	771 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	EDA	Q92838	391 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ASB7	Q9H672	318 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	WDR6	Q9NNW5	1121 aa	Known RBP	13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	ZDHHC7	Q9NXF8	308 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	FBXL5	Q9UKA1	691 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	PCDHB8	Q9UN66	801 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	POLI	Q9UNA4	740 aa		13.96	□□□□□ -0.17
ABCF3-215	ENST00000481116	CLUH	O75153	1309 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	WDR27	A2RRH5	827 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116		H7C4K7	107 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116		M0QZQ0	153 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	SPTLC1	O15269	473 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	C1R	P00736	705 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	GART	P22102	1010 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	GBP2	P32456	591 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	EHHADH	Q08426	723 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	PTPN21	Q16825	1174 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	FAM26F	Q5R3K3	315 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	LIN9	Q5TKA1	542 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	ARMCX5	Q6P1M9	558 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	DSTYK	Q6XUX3	929 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	EPM2AIP1	Q7L775	607 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	GRASP	Q7Z6J2	395 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	NELFCD	Q8IXH7	590 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	CEP57L1	Q8IYX8	460 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	ST13P5	Q8NFI4	369 aa	Predicted RBP	13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	PAGE5	Q96GU1	130 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	MYADM	Q96S97	322 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	TMEM206	Q9H813	350 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	MAGEF1	Q9HAY2	307 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	SLC39A2	Q9NP94	309 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	DPP3	Q9NY33	737 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	UST	Q9Y2C2	406 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	DERA	Q9Y315	318 aa		13.95	□□□□□ -0.18
ABCF3-215	ENST00000481116	ANO9	A1A5B4	782 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	PIR	O00625	290 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	CLIC2	O15247	247 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	KLRC4	O43908	158 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	ABLIM3	O94929	683 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	PAPLN	O95428	1278 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	SEC24A	O95486	1093 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	OR4Q2	P0C623	313 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	SLFN14	P0C7P3	912 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	CMA1	P23946	247 aa		13.94	□□□□□ -0.18
ABCF3-215	ENST00000481116	AARS	P49588	968 aa	Known RBP eCLIP	13.94	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms