RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CNBD2Q96M20 576 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 PRRG3Q9BZD7 231 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 TMEM94Q12767 1356 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 FAM47DPA6NHR8 397 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 USP17L10C9JJH3 530 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 TK2O00142 265 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 NCAPHQ15003 741 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 KBTBD12Q3ZCT8 623 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 FAM9CQ8IZT9 166 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 CYGBQ8WWM9 190 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 TUBGCP3Q96CW5 907 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 LY9Q9HBG7 655 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 LATS2Q9NRM7 1088 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 PDXKO00764 312 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 DGAT1O75907 488 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 PTPRN2Q92932 1015 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 EPN3Q9H201 632 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 DISP1Q96F81 1524 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 SYNDIG1LA6NDD5 238 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 MMP10P09238 476 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 ALDH18A1P54886 795 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 KRT17Q04695 432 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 TKFCQ3LXA3 575 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 RABGAP1LQ5R372 815 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 ARMC6Q6NXE6 501 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 TRIM65Q6PJ69 517 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 RANBP17Q9H2T7 1088 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 POTEFA5A3E0 1075 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 RPLP2P05387 115 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 POTEIP0CG38 1075 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 SERPINB1P30740 379 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 NFRKBQ6P4R8 1299 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 POTEGQ6S5H5 508 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 POTEEQ6S8J3 1075 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 PAK5Q9P286 719 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 STX3Q13277 289 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 PHKG1Q16816 387 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 UGT3A1Q6NUS8 523 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 WRNIP1Q96S55 665 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 EPS8L2Q9H6S3 715 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 PKP3Q9Y446 797 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF318Q5VUA4 2279 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 NCOA4Q13772 614 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 EME1Q96AY2 570 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 AGBL1Q96MI9 1066 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 C17orf80Q9BSJ5 609 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 MOV10L1Q9BXT6 1211 aaKnown RBP10□□□□□ -0.81
VEGFA-212ENST00000480614 EMSYQ7Z589 1322 aa10□□□□□ -0.81
VEGFA-212ENST00000480614 SLC2A3P11169 496 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 WLSQ5T9L3 541 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 DDX53Q86TM3 631 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 STAG2Q8N3U4 1231 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 PLA2G4AP47712 749 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ILF2Q12905 390 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 BYSLQ13895 437 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 XRRA1Q6P2D8 792 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SGSM3Q96HU1 749 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 NPM3O75607 178 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 EYA4O95677 639 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 LCP1P13796 627 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SPRP35270 261 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 MCAMP43121 646 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SENP7Q9BQF6 1050 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SEC31BQ9NQW1 1179 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 AP4S1Q9Y587 144 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SPACA6W5XKT8 324 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 KIF28PB7ZC32 967 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ALDH1A2O94788 518 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CDC25AP30304 524 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 TRIM71Q2Q1W2 868 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 RNPC3Q96LT9 517 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 EIF2AK1Q9BQI3 630 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 VIPAS39Q9H9C1 493 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 NARFQ9UHQ1 456 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CSPG5O95196 566 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ATP1A3P13637 1013 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SLC30A9Q6PML9 568 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 FAR2Q96K12 515 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CNPY3Q9BT09 278 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 TRPC7Q9HCX4 862 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 DOLKQ9UPQ8 538 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SH3BP1Q9Y3L3 701 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 KCNN4O15554 427 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 SGSM1Q2NKQ1 1148 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ZBTB12Q9Y330 459 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 PSMA4P25789 261 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 MAPK1P28482 360 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 PID1Q7Z2X4 250 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 TRIM8Q9BZR9 551 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CYP2D7A0A087X1C5 515 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 HEATR9A2RTY3 570 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 APRTP07741 180 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 DDX17Q92841 729 aaKnown RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF335Q9H4Z2 1342 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 LZTS3O60299 673 aaPredicted RBP9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ECE2O60344 883 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 CPB1P15086 417 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 RFC5P40937 340 aa9.99□□□□□ -0.81
VEGFA-212ENST00000480614 ZNF544Q6NX49 715 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms