RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 TRPC3Q13507 836 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 TMEM240Q5SV17 173 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 PPFIBP1Q86W92 1011 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 CNGA4Q8IV77 575 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 DRC7Q8IY82 874 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 TC2NQ8N9U0 490 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 RNF169Q8NCN4 708 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 URGCPQ8TCY9 931 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 PCMTD1Q96MG8 357 aaPredicted RBP18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 UROC1Q96N76 676 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 IMPG2Q9BZV3 1241 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 FHOD1Q9Y613 1164 aa18.12■□□□□ 0.49
SCAMP3-207ENST00000480219 GOLGA6L6A8MZA4 724 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 DGKIO75912 1065 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 FGBP02675 491 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 AMHP03971 560 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 ACRP10323 421 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 CASP14P31944 242 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 PNPLA4P41247 253 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 EPHB4P54760 987 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 WDR44Q5JSH3 913 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 IQCEQ6IPM2 695 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 LIMS2Q7Z4I7 341 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 ARHGEF19Q8IW93 802 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 SPC24Q8NBT2 197 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 CCDC150Q8NCX0 1101 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 HERVK_113Q902F9 699 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 SYN2Q92777 582 aaPredicted RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 ZNF689Q96CS4 500 aaPredicted RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 DDX27Q96GQ7 796 aaKnown RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 KREMEN1Q96MU8 473 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 DNAJC7Q99615 494 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 MRPL9Q9BYD2 267 aaKnown RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 STK33Q9BYT3 514 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 GPR88Q9GZN0 384 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 NUCKS1Q9H1E3 243 aaKnown RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 TBC1D13Q9NVG8 400 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 AJAP1Q9UKB5 411 aaPredicted RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 LRFN2Q9ULH4 789 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 AGAP1Q9UPQ3 857 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 LUC7L2Q9Y383 392 aaKnown RBP18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 NUB1Q9Y5A7 615 aa18.11■□□□□ 0.49
SCAMP3-207ENST00000480219 TDRD15B5MCY1 1934 aaKnown RBP18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 FNDC1Q4ZHG4 1894 aaPredicted RBP18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 AKR1B15C9JRZ8 316 aaPredicted RBP18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 TMEM189-UBE2V1I3L0A0 370 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 TPM1P09493 284 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 TBXAS1P24557 533 aaPredicted RBP18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 AARSP49588 968 aaKnown RBP eCLIP18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 POLR2FP61218 127 aaKnown RBP18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 UPP1Q16831 310 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 ZNF699Q32M78 642 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 RASIP1Q5U651 963 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 ZNF365Q70YC5 407 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 UBR7Q8N806 425 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 SHC3Q92529 594 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 TATDN2Q93075 761 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 HPDLQ96IR7 371 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 ZNF560Q96MR9 790 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 PI4K2AQ9BTU6 479 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 BCO2Q9BYV7 579 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 NIF3L1Q9GZT8 377 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 GDAP2Q9NXN4 497 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 DNAJC12Q9UKB3 198 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 CNTN6Q9UQ52 1028 aa18.1■□□□□ 0.49
SCAMP3-207ENST00000480219 PPEF2O14830 753 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 POMCP01189 267 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 FAM163BP0C2L3 166 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 DEFB103AP81534 67 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 CUL2Q13617 745 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 PDXDC1Q6P996 788 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 GJB7Q6PEY0 223 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 FMNL3Q8IVF7 1028 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 COLGALT2Q8IYK4 626 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 TMEM130Q8N3G9 435 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 ZNF397Q8NF99 534 aaPredicted RBP18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 DPF3Q92784 378 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 PANX2Q96RD6 677 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 GOLGA2P5Q9HBQ8 144 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 UBE2TQ9NPD8 197 aaPredicted RBP18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 AIPL1Q9NZN9 384 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 NR2E3Q9Y5X4 410 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 PTPRSQ13332 1948 aa18.09■□□□□ 0.49
SCAMP3-207ENST00000480219 F8VZ95 297 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 B4GALT3O60512 393 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 DDHD2O94830 711 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 KRT19P08727 400 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 SYN1P17600 705 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 ACO1P21399 889 aaKnown RBP18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 KRT9P35527 623 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 ASPAP45381 313 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 MFAP3P55082 362 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 MYO1EQ12965 1108 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 MEA1Q16626 185 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 ZNF667Q5HYK9 610 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 SPOPLQ6IQ16 392 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 CCDC186Q7Z3E2 898 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 CACNA2D4Q7Z3S7 1137 aa18.08■□□□□ 0.48
SCAMP3-207ENST00000480219 ABI1Q8IZP0 508 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms