RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 MAGEB2O15479 319 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 KLHL41O60662 606 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 LSM8O95777 96 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 USP17L8P0C7I0 530 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 DYNLT1P63172 113 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PRAMEP78395 509 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 NAB1Q13506 487 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 KIF19Q2TAC6 998 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM65Q6PJ69 517 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 LRRC34Q8IZ02 419 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 CCDC33Q8N5R6 958 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TPCN2Q8NHX9 752 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SLC35G2Q8TBE7 412 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 HINFPQ9BQA5 517 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PCIF1Q9H4Z3 704 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 RGL1Q9NZL6 768 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 APPL1Q9UKG1 709 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 F5H6K3 240 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 NCK2O43639 380 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 RFC5P40937 340 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SCNN1DP51172 638 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 EIF3EP60228 445 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ROR2Q01974 943 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 KLRC3Q07444 240 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ITGA9Q13797 1035 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SNX17Q15036 470 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ANO4Q32M45 955 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ELMSAN1Q6PJG2 1045 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ATG9AQ7Z3C6 839 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 LINC00523Q86TU6 105 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MYLK4Q86YV6 388 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 THNSL1Q8IYQ7 743 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TRAPPC9Q96Q05 1148 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 HEMGNQ9BXL5 484 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TUBA8Q9NY65 449 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SMARCAL1Q9NZC9 954 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 AGO2Q9UKV8 859 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 LOC102724159A0A0B4J2E5 919 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PNMA8CA0A1B0GUJ8 204 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP27B1O15528 508 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 F9P00740 461 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MAPTP10636 758 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 GNAT1P11488 350 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 NPR1P16066 1061 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 CYP11B2P19099 503 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 CDK16Q00536 496 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 DDR1Q08345 913 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 CSTF3Q12996 717 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF211Q13398 564 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MTMR1Q13613 665 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 FLOT2Q14254 428 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PWP2Q15269 919 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ZYXQ15942 572 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TMTC4Q5T4D3 741 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 RHPN2Q8IUC4 686 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MICU2Q8IYU8 434 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 HIPK4Q8NE63 616 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 AENQ8WTP8 325 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TADA1Q96BN2 335 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 OLFM1Q99784 485 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 AGPAT5Q9NUQ2 364 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PCDHGC5Q9Y5F6 944 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MAGI3Q5TCQ9 1506 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SUPT3HO75486 399 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ANP32DO95626 131 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SARSP49591 514 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 SERPINB8P50452 374 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 DSG1Q02413 1049 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 DCTN2Q13561 401 aaKnown RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PTK6Q13882 451 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MXD4Q14582 209 aaPredicted RBP6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 TRIM16LQ309B1 348 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 LCA5Q86VQ0 697 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 FBXO25Q8TCJ0 367 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 MED15Q96RN5 788 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 LACRTQ9GZZ8 138 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 PLEKHA5Q9HAU0 1116 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 CD209Q9NNX6 404 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 C8orf4Q9NR00 106 aa6.45□□□□□ -1.38
PRPF4B-205ENST00000480058 ROBO2Q9HCK4 1378 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 CLPTM1O96005 669 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RPLP2P05387 115 aaKnown RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NUDT17P0C025 328 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PRR29P0C7W0 189 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 GARTP22102 1010 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PEX5P50542 639 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ANTXR2P58335 489 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RBP5P82980 135 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ARID3BQ8IVW6 561 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RBBP8NLQ8NC74 664 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RAPGEF5Q92565 580 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NR1H4Q96RI1 486 aaPredicted RBP6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PNKPQ96T60 521 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 RMDN3Q96TC7 470 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 NIF3L1Q9GZT8 377 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 BRD8Q9H0E9 1235 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 GTSE1Q9NYZ3 720 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 PNMA3Q9UL41 463 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 ZNF711Q9Y462 761 aa6.44□□□□□ -1.38
PRPF4B-205ENST00000480058 A0A087X0T9 212 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms