RNA–Protein interactions for RNA: ENST00000479487.1

ATRX-205, Transcript of ATRX, chromatin remodeler, humanhuman

TSL 3

Gene ATRX, Length 408 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRX-205ENST00000479487 STC2O76061 302 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 BAG4O95429 457 aaKnown RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 MBD3O95983 291 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 IGHDP01880 384 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 PTMAP06454 111 aaKnown RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 C1SP09871 688 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 ALOX15P16050 662 aaPredicted RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 ECHS1P30084 290 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 SREBF1P36956 1147 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 SCNN1GP51170 649 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 ATXN1P54253 815 aaKnown RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 CDK17Q00537 523 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 APBA1Q02410 837 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 TOB2Q14106 344 aaPredicted RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 ZSCAN23Q3MJ62 389 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 FAM47AQ5JRC9 791 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 Q6ZRM9 215 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 ZNF771Q7L3S4 317 aaPredicted RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 FAM184AQ8NB25 1140 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 DDX55Q8NHQ9 600 aaKnown RBP eCLIP3.47□□□□□ -1.85
ATRX-205ENST00000479487 PIBF1Q8WXW3 757 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 ANKRD7Q92527 254 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 SYAP1Q96A49 352 aaPredicted RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 FAXDC2Q96IV6 333 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 TIGD1Q96MW7 591 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 ZNF830Q96NB3 372 aaPredicted RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 CDC5LQ99459 802 aaKnown RBP3.47□□□□□ -1.85
ATRX-205ENST00000479487 MNTQ99583 582 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 KCNH6Q9H252 994 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 YY1AP1Q9H869 796 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 MMRN2Q9H8L6 949 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 PANK3Q9H999 370 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 OGFRQ9NZT2 677 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 CALCOCO1Q9P1Z2 691 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 KANK1Q14678 1352 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 ABCA6Q8N139 1617 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 MYO3AQ8NEV4 1616 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 PCSK5Q92824 1860 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 DISP3Q9P2K9 1392 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 A2MP01023 1474 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 MYOM2P54296 1465 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 PLB1Q6P1J6 1458 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 TUBGCP6Q96RT7 1819 aa3.47□□□□□ -1.85
ATRX-205ENST00000479487 MAST1Q9Y2H9 1570 aa3.46□□□□□ -1.85
ATRX-205ENST00000479487 TROQ12816 1431 aaPredicted RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 DIRC3C9JPN6 131 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 TRIM24O15164 1050 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 AKR1B10O60218 316 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA12O60330 932 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 TPM3P06753 285 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 IBSPP21815 317 aaPredicted RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 IARSP41252 1262 aaKnown RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 SLC6A9P48067 706 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 CBX1P83916 185 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 EXOSC10Q01780 885 aaKnown RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 VPS72Q15906 364 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 BMT2Q1RMZ1 405 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 TMEM240Q5SV17 173 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PRAMEF14Q5SWL7 426 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 OTUD7BQ6GQQ9 843 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 ELOA2Q8IYF1 753 aaPredicted RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 ABCF1Q8NE71 845 aaKnown RBP eCLIP3.46□□□□□ -1.86
ATRX-205ENST00000479487 JADE3Q92613 823 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 CLIP3Q96DZ5 547 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 FUBP3Q96I24 572 aaKnown RBP eCLIP3.46□□□□□ -1.86
ATRX-205ENST00000479487 GPR87Q9BY21 358 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 CPEB1Q9BZB8 566 aaKnown RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 TCF7L1Q9HCS4 588 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 HOMER2Q9NSB8 354 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 NCDNQ9UBB6 729 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 TUBD1Q9UJT1 453 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 SIK3Q9Y2K2 1263 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA9Q9Y5G4 932 aaKnown RBP3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA8Q9Y5G5 932 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA7Q9Y5G6 932 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA6Q9Y5G7 932 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA3Q9Y5H0 932 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 PCDHGA2Q9Y5H1 932 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.46□□□□□ -1.86
ATRX-205ENST00000479487 ANKRD36BQ8N2N9 1353 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 MED14O60244 1454 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 MAGI2Q86UL8 1455 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 FANCD2Q9BXW9 1451 aa3.46□□□□□ -1.86
ATRX-205ENST00000479487 ANKRD26Q9UPS8 1709 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 KLHL33A6NCF5 533 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 TBKBP1A7MCY6 615 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 VGLL3A8MV65 326 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 TULP2O00295 520 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 TEX33O43247 280 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 ADCY6O43306 1168 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 CTIFO43310 598 aaKnown RBP3.45□□□□□ -1.86
ATRX-205ENST00000479487 SGTAO43765 313 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 KATNA1O75449 491 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 SNRPA1P09661 255 aaKnown RBP3.45□□□□□ -1.86
ATRX-205ENST00000479487 CT47B1P0C2W7 299 aaPredicted RBP3.45□□□□□ -1.86
ATRX-205ENST00000479487 OSMP13725 252 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 IL2RBP14784 551 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 MGAT1P26572 445 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 PPP2R1AP30153 589 aa3.45□□□□□ -1.86
ATRX-205ENST00000479487 ADKP55263 362 aaKnown RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms