RNA–Protein interactions for RNA: ENST00000479440.1

DDX56-210, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-210ENST00000479440 MAFFQ9ULX9 164 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 NUB1Q9Y5A7 615 aa17.67■□□□□ 0.42
DDX56-210ENST00000479440 SMIM28A0A1B0GU29 152 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 ARHGEF35A5YM69 484 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 HEPACAM2A8MVW5 462 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 K7ESF4 209 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 ARNTLO00327 626 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 SEC24AO95486 1093 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 MYL4P12829 197 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
DDX56-210ENST00000479440 VIPR2P41587 438 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 KPNA1P52294 538 aaPredicted RBP17.66■□□□□ 0.42
DDX56-210ENST00000479440 EPHA5P54756 1037 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 SRSF5Q13243 272 aaKnown RBP17.66■□□□□ 0.42
DDX56-210ENST00000479440 CTXN3Q4LDR2 81 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 DGKKQ5KSL6 1271 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 FAM160A2Q8N612 972 aaPredicted RBP17.66■□□□□ 0.42
DDX56-210ENST00000479440 TNFRSF25Q93038 417 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 ZSWIM3Q96MP5 696 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 NACC1Q96RE7 527 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 PDRG1Q9NUG6 133 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 FBXL5Q9UKA1 691 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 USP20Q9Y2K6 914 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 SPTBN2O15020 2390 aa17.66■□□□□ 0.42
DDX56-210ENST00000479440 A0A087WWV3 80 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 NRG2O14511 850 aaPredicted RBP17.65■□□□□ 0.42
DDX56-210ENST00000479440 CHADO15335 359 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 SPATA31C1P0DKV0 1188 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 CYP11B2P19099 503 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 GRM5P41594 1212 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 SHC2P98077 582 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 HEATR6Q6AI08 1181 aaKnown RBP17.65■□□□□ 0.42
DDX56-210ENST00000479440 WDR5BQ86VZ2 330 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 CATSPER3Q86XQ3 398 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 HS6ST3Q8IZP7 471 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 ERMNQ8TAM6 284 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 KIFC3Q9BVG8 833 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 ORC3Q9UBD5 711 aaPredicted RBP17.65■□□□□ 0.42
DDX56-210ENST00000479440 TNFSF13BQ9Y275 285 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 NCANO14594 1321 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 PHLPP2Q6ZVD8 1323 aa17.65■□□□□ 0.42
DDX56-210ENST00000479440 SLC38A8A6NNN8 435 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 MOSPD3O75425 235 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 CPB1P15086 417 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 HOXA6P31267 233 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 SOX4Q06945 474 aaPredicted RBP17.64■□□□□ 0.41
DDX56-210ENST00000479440 PLD1Q13393 1074 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 MRPL58Q14197 206 aaKnown RBP17.64■□□□□ 0.41
DDX56-210ENST00000479440 TEAD2Q15562 447 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 ZNF568Q3ZCX4 644 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 PADI6Q6TGC4 694 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 Q6ZS52 159 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 APPL2Q8NEU8 664 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 LOXL4Q96JB6 756 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 MTMR9Q96QG7 549 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 POLR3CQ9BUI4 534 aaPredicted RBP17.64■□□□□ 0.41
DDX56-210ENST00000479440 RBM12Q9NTZ6 932 aaKnown RBP17.64■□□□□ 0.41
DDX56-210ENST00000479440 CEP72Q9P209 647 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 YIPF1Q9Y548 306 aa17.64■□□□□ 0.41
DDX56-210ENST00000479440 MAP1BP46821 2468 aaKnown RBP17.64■□□□□ 0.41
DDX56-210ENST00000479440 MED24O75448 989 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 GJA1P17302 382 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 MCM4P33991 863 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 FCHO2Q0JRZ9 810 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 XKR4Q5GH76 650 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 N4BP2L1Q5TBK1 243 aaPredicted RBP17.63■□□□□ 0.41
DDX56-210ENST00000479440 NT5DC1Q5TFE4 455 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 HAUS6Q7Z4H7 955 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 RALGPS2Q86X27 583 aaPredicted RBP17.63■□□□□ 0.41
DDX56-210ENST00000479440 CEP120Q8N960 986 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 SHKBP1Q8TBC3 707 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
DDX56-210ENST00000479440 MYBPHLA2RUH7 354 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 SPECC1L-ADORA2AF8WAN1 911 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 PFKFB2O60825 505 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 CTHP32929 405 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 RPL9P32969 192 aaKnown RBP17.62■□□□□ 0.41
DDX56-210ENST00000479440 SOX9P48436 509 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 HAUS3Q68CZ6 603 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 SYNPOQ8N3V7 929 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 SUSD3Q96L08 255 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 CDT1Q9H211 546 aa17.62■□□□□ 0.41
DDX56-210ENST00000479440 PDCD11Q14690 1871 aaKnown RBP17.61■□□□□ 0.41
DDX56-210ENST00000479440 K7ERI5 159 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 DPYSL4O14531 572 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 EPN2O95208 641 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 KCNE1P15382 129 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 RPA1P27694 616 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 OSTNP61366 133 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 SF3A2Q15428 464 aaKnown RBP17.61■□□□□ 0.41
DDX56-210ENST00000479440 ALKAL1Q6UXT8 129 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 DDX12PQ92771 950 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 OXCT2Q9BYC2 517 aaPredicted RBP17.61■□□□□ 0.41
DDX56-210ENST00000479440 ARRDC1-AS1Q9H2J1 176 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 CNTN3Q9P232 1028 aa17.61■□□□□ 0.41
DDX56-210ENST00000479440 A0A1W2PRU2 124 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 WNT7AO00755 349 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 AXIN1O15169 862 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 ZNF806P0C7X5 589 aa17.6■□□□□ 0.41
DDX56-210ENST00000479440 MUTP22033 750 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms