RNA–Protein interactions for RNA: ENST00000479309.6

SPC25-204, Transcript of SPC25, NDC80 kinetochore complex component, humanhuman

TSL 5

Gene SPC25, Length 510 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPC25-204ENST00000479309 SLC6A4P31645 630 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 SLC16A1P53985 500 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 CREMQ03060 361 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 TARDBPQ13148 414 aaKnown RBP eCLIP4.48□□□□□ -1.691e-9■■■■□ 20.1
SPC25-204ENST00000479309 PABPC1LQ4VXU2 614 aaKnown RBP4.48□□□□□ -1.69
SPC25-204ENST00000479309 ZNF362Q5T0B9 420 aaPredicted RBP4.48□□□□□ -1.69
SPC25-204ENST00000479309 SYDE2Q5VT97 1194 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 MIGA2Q7L4E1 593 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 RD3Q7Z3Z2 195 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 RHOT1Q8IXI2 618 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 SLC44A3Q8N4M1 653 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 HDAC10Q969S8 669 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 MRGPRX4Q96LA9 322 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 AIFM2Q9BRQ8 373 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 LRFN3Q9BTN0 628 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 CASS4Q9NQ75 786 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 SEMA4GQ9NTN9 838 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 KCTD5Q9NXV2 234 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 CALCOCO1Q9P1Z2 691 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.48□□□□□ -1.69
SPC25-204ENST00000479309 TLK1Q9UKI8 766 aa4.48□□□□□ -1.69
SPC25-204ENST00000479309 RUVBL1Q9Y265 456 aaKnown RBP4.48□□□□□ -1.69
SPC25-204ENST00000479309 MTO1Q9Y2Z2 717 aaKnown RBP4.48□□□□□ -1.69
SPC25-204ENST00000479309 CDHR4A6H8M9 788 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 KLHL33A6NCF5 533 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 FZD9O00144 591 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PCDHGA12O60330 932 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 SLC43A1O75387 559 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 MTHFD1P11586 935 aaKnown RBP4.47□□□□□ -1.69
SPC25-204ENST00000479309 FCER1AP12319 257 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 C5AR1P21730 350 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 EDNRBP24530 442 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 CACNA2D1P54289 1103 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 RAB39AQ14964 217 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PGM2L1Q6PCE3 622 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 TBC1D15Q8TC07 691 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PTCD3Q96EY7 689 aaKnown RBP4.47□□□□□ -1.69
SPC25-204ENST00000479309 DUSP26Q9BV47 211 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 TDP1Q9NUW8 608 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 MKS1Q9NXB0 559 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 JKAMPQ9P055 326 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PCDHGA9Q9Y5G4 932 aaKnown RBP4.47□□□□□ -1.69
SPC25-204ENST00000479309 PCDHGA8Q9Y5G5 932 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PCDHGA7Q9Y5G6 932 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PCDHGA6Q9Y5G7 932 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 PCDHGA3Q9Y5H0 932 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 TNFRSF18Q9Y5U5 241 aa4.47□□□□□ -1.69
SPC25-204ENST00000479309 FNDC1Q4ZHG4 1894 aaPredicted RBP4.46□□□□□ -1.7
SPC25-204ENST00000479309 PRAMEF33A0A0G2JMD5 474 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 MASP2O00187 686 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 KIAA0391O15091 583 aaKnown RBP4.46□□□□□ -1.7
SPC25-204ENST00000479309 GRM6O15303 877 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 HTRA2O43464 458 aaPredicted RBP4.46□□□□□ -1.7
SPC25-204ENST00000479309 PRAMEF10O60809 474 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 PROP1O75360 226 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 PLA2G5P39877 138 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 IARSP41252 1262 aaKnown RBP4.46□□□□□ -1.7
SPC25-204ENST00000479309 FOLR3P41439 243 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 MRPS21P82921 87 aaKnown RBP4.46□□□□□ -1.7
SPC25-204ENST00000479309 PPP4R3AQ6IN85 833 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 VWA1Q6PCB0 445 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 TMPRSS9Q7Z410 1059 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 PPM1NQ8N819 430 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 BOLLQ8N9W6 283 aaKnown RBP4.46□□□□□ -1.7
SPC25-204ENST00000479309 COA7Q96BR5 231 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 DMRTA2Q96SC8 542 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 CTTNBP2NLQ9P2B4 639 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 LIMCH1Q9UPQ0 1083 aa4.46□□□□□ -1.7
SPC25-204ENST00000479309 SBNO2Q9Y2G9 1366 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 SHTN1A0MZ66 631 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 E7ENX8 843 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 MPPED1O15442 326 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 C1QL1O75973 258 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 IGLV2-14P01704 120 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 ANXA1P04083 346 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 KCNA2P16389 499 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 POU6F2P78424 691 aaPredicted RBP4.45□□□□□ -1.7
SPC25-204ENST00000479309 MRPS35P82673 323 aaKnown RBP4.45□□□□□ -1.7
SPC25-204ENST00000479309 TAP2Q03519 686 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 TLE1Q04724 770 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 CLUL1Q15846 466 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 GEN1Q17RS7 908 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 NBPF8Q3BBV2 869 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 RSPH3Q86UC2 560 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 SSH3Q8TE77 659 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 TMX3Q96JJ7 454 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 SLC13A1Q9BZW2 595 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 INTS13Q9NVM9 706 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 VSX1Q9NZR4 365 aaPredicted RBP4.45□□□□□ -1.7
SPC25-204ENST00000479309 SLC17A6Q9P2U8 582 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 LRIT1Q9P2V4 623 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 PCDHA13Q9Y5I0 950 aa4.45□□□□□ -1.7
SPC25-204ENST00000479309 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
SPC25-204ENST00000479309 GABRDO14764 452 aa4.44□□□□□ -1.7
SPC25-204ENST00000479309 MGST3O14880 152 aa4.44□□□□□ -1.7
SPC25-204ENST00000479309 AGFG2O95081 481 aa4.44□□□□□ -1.7
SPC25-204ENST00000479309 C1RP00736 705 aa4.44□□□□□ -1.7
SPC25-204ENST00000479309 SBK3P0C264 359 aa4.44□□□□□ -1.7
SPC25-204ENST00000479309 CDK11BP21127 795 aaKnown RBP4.44□□□□□ -1.7
SPC25-204ENST00000479309 PTH2RP49190 550 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms