RNA–Protein interactions for RNA: ENST00000479100.1

COL16A1-211, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 740 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-211ENST00000479100 ERVFC1P60507 584 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 DUOXA2Q1HG44 320 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 TIGD5Q53EQ6 642 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 TTI2Q6NXR4 508 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 FUT10Q6P4F1 479 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 RBM43Q6ZSC3 357 aaKnown RBP16.44■□□□□ 0.22
COL16A1-211ENST00000479100 TAS1R1Q7RTX1 841 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 OR5B17Q8NGF7 314 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 PLEKHO2Q8TD55 490 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 TMEM174Q8WUU8 243 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 DUSP9Q99956 384 aaKnown RBP16.44■□□□□ 0.22
COL16A1-211ENST00000479100 TCF25Q9BQ70 676 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 VN1R3Q9BXE9 311 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 GPR62Q9BZJ7 368 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 CD320Q9NPF0 282 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 INTS13Q9NVM9 706 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 R3HCC1Q9Y3T6 440 aaKnown RBP16.44■□□□□ 0.22
COL16A1-211ENST00000479100 PCDHGC5Q9Y5F6 944 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 SF3B1O75533 1304 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL16A1-211ENST00000479100 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
COL16A1-211ENST00000479100 I3L4J1 428 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 CXCL14O95715 111 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 ITGB3P05106 788 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 KRT19P08727 400 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 KCNA5P22460 613 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 BRCC3P46736 316 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 VAMP7P51809 220 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 CAMK1Q14012 370 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 BMS1Q14692 1282 aaKnown RBP16.43■□□□□ 0.22
COL16A1-211ENST00000479100 NFKBIBQ15653 356 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 TPD52L1Q16890 204 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-211ENST00000479100 SKOR2Q2VWA4 1001 aaPredicted RBP16.43■□□□□ 0.22
COL16A1-211ENST00000479100 TCEAL5Q5H9L2 206 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 FAM171A1Q5VUB5 890 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 C9orf57Q5W0N0 161 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 KIAA1841Q6NSI8 718 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 CEP57Q86XR8 500 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 WDR49Q8IV35 697 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 CSGALNACT2Q8N6G5 542 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 C3orf58Q8NDZ4 430 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 AUTS2Q8WXX7 1259 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 B3GALT6Q96L58 329 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 RWDD2AQ9UIY3 292 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 AGAP1Q9UPQ3 857 aa16.43■□□□□ 0.22
COL16A1-211ENST00000479100 PLXNA4Q9HCM2 1894 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 LRRIQ3A6PVS8 624 aaPredicted RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 TMEM189-UBE2V1I3L0A0 370 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 C2CD2LO14523 706 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 MAPK13O15264 365 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 PHACTR2O75167 634 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 SOD2P04179 222 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 POLR2BP30876 1174 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 DLG4P78352 724 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 ELAVL2Q12926 359 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 USP41Q3LFD5 358 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 CCDC40Q4G0X9 1142 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 CD300LGQ6UXG3 332 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 INTS8Q75QN2 995 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 USP37Q86T82 979 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 C1orf127Q8N9H9 656 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 PARD3BQ8TEW8 1205 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 PABPC5Q96DU9 382 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 CEP63Q96MT8 703 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 HERC2P3Q9BVR0 1158 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 SRRTQ9BXP5 876 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 NSUN3Q9H649 340 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 EPHX3Q9H6B9 360 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 ANO10Q9NW15 660 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 STK39Q9UEW8 545 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 ITGA11Q9UKX5 1188 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 ANK1P16157 1881 aa16.42■□□□□ 0.22
COL16A1-211ENST00000479100 PDCD11Q14690 1871 aaKnown RBP16.42■□□□□ 0.22
COL16A1-211ENST00000479100 TCF20Q9UGU0 1960 aaKnown RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 GRXCR2A6NFK2 248 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 SLC16A3O15427 465 aaKnown RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 CLSTN1O94985 981 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 URODP06132 367 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 TRIM49P0CI25 452 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 TRIM49CP0CI26 452 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 COL9A1P20849 921 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 RBP5P82980 135 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 BIRC3Q13489 604 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 SMC1AQ14683 1233 aaKnown RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 STX1AQ16623 288 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 CTC1Q2NKJ3 1217 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 PDE12Q6L8Q7 609 aaKnown RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 DSTYKQ6XUX3 929 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 TRAPPC11Q7Z392 1133 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 ZC3H3Q8IXZ2 948 aaKnown RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 TMC2Q8TDI7 906 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 ZNF516Q92618 1163 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 MKNK1Q9BUB5 465 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 GZF1Q9H116 711 aaPredicted RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 ZBP1Q9H171 429 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 MMRN2Q9H8L6 949 aa16.41■□□□□ 0.22
COL16A1-211ENST00000479100 NGRNQ9NPE2 291 aaKnown RBP16.41■□□□□ 0.22
COL16A1-211ENST00000479100 MYO7AQ13402 2215 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms