RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 TCEAL8Q8IYN2 117 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 RUBCNQ92622 972 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 DDX12PQ92771 950 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 ELSPBP1Q96BH3 223 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 TBC1D32Q96NH3 1257 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 PLIN2Q99541 437 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 MMTAG2Q9BU76 263 aaKnown RBP14.46□□□□□ -0.09
VCL-205ENST00000478896 PLA2G2FQ9BZM2 168 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 BRD9Q9H8M2 597 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 TUBGCP4Q9UGJ1 667 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 FBXO4Q9UKT5 387 aa14.46□□□□□ -0.09
VCL-205ENST00000478896 MRPS17Q9Y2R5 130 aaKnown RBP14.46□□□□□ -0.09
VCL-205ENST00000478896 SPTLC1O15269 473 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 CLDN3O15551 220 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 CXCL8P10145 99 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 CACNB1Q02641 598 aaPredicted RBP14.45□□□□□ -0.1
VCL-205ENST00000478896 YWHAHQ04917 246 aaPredicted RBP14.45□□□□□ -0.1
VCL-205ENST00000478896 TWF1Q12792 350 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 ZNF528Q3MIS6 628 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 TANGO2Q6ICL3 276 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 MAML2Q8IZL2 1156 aaPredicted RBP14.45□□□□□ -0.1
VCL-205ENST00000478896 TMEM161BQ8NDZ6 487 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 SPIRE2Q8WWL2 714 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 ATRIPQ8WXE1 791 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 DNASE1L2Q92874 299 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 TCEAL4Q96EI5 215 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 ZNF512Q96ME7 567 aaPredicted RBP14.45□□□□□ -0.1
VCL-205ENST00000478896 NELL2Q99435 816 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 ASAH2Q9NR71 780 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 AFF4Q9UHB7 1163 aaKnown RBP14.45□□□□□ -0.1
VCL-205ENST00000478896 TICRRQ7Z2Z1 1910 aa14.45□□□□□ -0.1
VCL-205ENST00000478896 RIF1Q5UIP0 2472 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 VWA3AA6NCI4 1184 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 H0YCG3 227 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 H3BQV1 296 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 TBC1D4O60343 1298 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 MAPTP10636 758 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 MYL4P12829 197 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 ATP2C1P98194 919 aaPredicted RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 PPP2R3AQ06190 1150 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 SPAG1Q07617 926 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 MRPL58Q14197 206 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 SLC10A6Q3KNW5 377 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 FAM78AQ5JUQ0 283 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 ZPBP2Q6X784 338 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 USP37Q86T82 979 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 SYT2Q8N9I0 419 aaPredicted RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 KIF12Q96FN5 646 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 NTPCRQ9BSD7 190 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 TRMT61BQ9BVS5 477 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 SLITRK6Q9H5Y7 841 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 KCND2Q9NZV8 630 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 LARSQ9P2J5 1176 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 NCDNQ9UBB6 729 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 NDRG2Q9UN36 371 aaKnown RBP14.44□□□□□ -0.1
VCL-205ENST00000478896 PCDHB8Q9UN66 801 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 PCDHGA2Q9Y5H1 932 aa14.44□□□□□ -0.1
VCL-205ENST00000478896 MEFVO15553 781 aaPredicted RBP14.43□□□□□ -0.1
VCL-205ENST00000478896 XPOTO43592 962 aaKnown RBP14.43□□□□□ -0.1
VCL-205ENST00000478896 MICAL2O94851 1124 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 PLA2G4BP0C869 781 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 FCARP24071 287 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 CCR2P41597 374 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 LIG4P49917 911 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 MCL1Q07820 350 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 HYIQ5T013 277 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 RNF19BQ6ZMZ0 732 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 DGLUCYQ7Z3D6 616 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 HS6ST3Q8IZP7 471 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 DCLK2Q8N568 766 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 KCTD17Q8N5Z5 321 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 LEMD2Q8NC56 503 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 IRF7Q92985 503 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 SECISBP2LQ93073 1101 aaKnown RBP14.43□□□□□ -0.1
VCL-205ENST00000478896 ASB16Q96NS5 453 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 PGLYRP2Q96PD5 576 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 PNMA5Q96PV4 448 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 KIF2CQ99661 725 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 PLEKHA5Q9HAU0 1116 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 UBQLN1Q9UMX0 589 aaKnown RBP14.43□□□□□ -0.1
VCL-205ENST00000478896 YIPF1Q9Y548 306 aa14.43□□□□□ -0.1
VCL-205ENST00000478896 TIMM13Q9Y5L4 95 aaPredicted RBP14.43□□□□□ -0.1
VCL-205ENST00000478896 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.43□□□□□ -0.1
VCL-205ENST00000478896 VPS13AQ96RL7 3174 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 NPHP3-ACAD11A0A0J9YXS1 232 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 K7ENM7 598 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 MAN2B1O00754 1011 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 HNRNPDLO14979 420 aaKnown RBP14.42□□□□□ -0.1
VCL-205ENST00000478896 CLTAP09496 248 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 GJA1P17302 382 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 PSMC3P17980 439 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 GDI1P31150 447 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 TNFSF9P41273 254 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 RPS9P46781 194 aaKnown RBP14.42□□□□□ -0.1
VCL-205ENST00000478896 SLC12A3P55017 1021 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 PLD1Q13393 1074 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 POTEHQ6S545 545 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 TSSK4Q6SA08 328 aa14.42□□□□□ -0.1
VCL-205ENST00000478896 DSTYKQ6XUX3 929 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms