RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 PARM1Q6UWI2 310 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 SV2BQ7L1I2 683 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 DYMQ7RTS9 669 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 GRASPQ7Z6J2 395 aaPredicted RBP17.22■□□□□ 0.35
GARNL3-215ENST00000478702 SFR1Q86XK3 245 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 MAP4K3Q8IVH8 894 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 HASPINQ8TF76 798 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 DNAJC19Q96DA6 116 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 BICD1Q96G01 975 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 ZBTB45Q96K62 511 aaPredicted RBP17.22■□□□□ 0.35
GARNL3-215ENST00000478702 PPP1R10Q96QC0 940 aaKnown RBP17.22■□□□□ 0.35
GARNL3-215ENST00000478702 CLSTN3Q9BQT9 956 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 TCHPQ9BT92 498 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 ZHX3Q9H4I2 956 aa17.22■□□□□ 0.35
GARNL3-215ENST00000478702 GPR179Q6PRD1 2367 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 CASTOR2A6NHX0 329 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 HNRNPDLO14979 420 aaKnown RBP17.21■□□□□ 0.35
GARNL3-215ENST00000478702 TADA2AO75478 443 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 NMT1P30419 496 aaKnown RBP17.21■□□□□ 0.35
GARNL3-215ENST00000478702 OSTNP61366 133 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 GTF2BQ00403 316 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 DCLK2Q8N568 766 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 PDILTQ8N807 584 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 LNX1Q8TBB1 728 aaPredicted RBP17.21■□□□□ 0.35
GARNL3-215ENST00000478702 HAPLN2Q9GZV7 340 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 ST6GALNAC4Q9H4F1 302 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 CNTN3Q9P232 1028 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 SEL1LQ9UBV2 794 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 CFAP45Q9UL16 551 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 ZDHHC9Q9Y397 364 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 ZFP37Q9Y6Q3 630 aaPredicted RBP17.21■□□□□ 0.35
GARNL3-215ENST00000478702 COL4A2P08572 1712 aa17.21■□□□□ 0.35
GARNL3-215ENST00000478702 SF3B1O75533 1304 aaKnown RBP eCLIP17.21■□□□□ 0.34
GARNL3-215ENST00000478702 TSC2P49815 1807 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 FRMD3A2A2Y4 597 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 CLDN3O15551 220 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 MEFVO15553 781 aaPredicted RBP17.2■□□□□ 0.34
GARNL3-215ENST00000478702 ADAM12O43184 909 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 PPP1R37O75864 691 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 KIF4AO95239 1232 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 GAP43P17677 238 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 LIG4P49917 911 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 CREMQ03060 361 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 ALKAL1Q6UXT8 129 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 SUMF1Q8NBK3 374 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 PIK3R5Q8WYR1 880 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 ACAP3Q96P50 834 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 DDX23Q9BUQ8 820 aaKnown RBP17.2■□□□□ 0.34
GARNL3-215ENST00000478702 TNMDQ9H2S6 317 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 CUEDC2Q9H467 287 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 CDH7Q9ULB5 785 aa17.2■□□□□ 0.34
GARNL3-215ENST00000478702 TICRRQ7Z2Z1 1910 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 SMIM28A0A1B0GU29 152 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 TMEM189-UBE2V1I3L0A0 370 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 FAM189A1O60320 539 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 C8AP07357 584 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 IGFBP6P24592 240 aaPredicted RBP17.19■□□□□ 0.34
GARNL3-215ENST00000478702 SNW1Q13573 536 aaKnown RBP17.19■□□□□ 0.34
GARNL3-215ENST00000478702 PSMD5Q16401 504 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 FAM171A1Q5VUB5 890 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 SLC39A4Q6P5W5 647 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 ZC3H14Q6PJT7 736 aaKnown RBP17.19■□□□□ 0.34
GARNL3-215ENST00000478702 ITFG1Q8TB96 612 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 FGF13Q92913 245 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 HVCN1Q96D96 273 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 UROC1Q96N76 676 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 TTPALQ9BTX7 342 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 PANK2Q9BZ23 570 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 OLFML3Q9NRN5 406 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 KBTBD4Q9NVX7 518 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 PCDHA7Q9UN72 937 aa17.19■□□□□ 0.34
GARNL3-215ENST00000478702 MTF2Q9Y483 593 aaPredicted RBP17.19■□□□□ 0.34
GARNL3-215ENST00000478702 CCL16O15467 120 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 HNRNPA1P09651 372 aaKnown RBP eCLIP17.18■□□□□ 0.34
GARNL3-215ENST00000478702 KCNE1P15382 129 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 MATR3P43243 847 aaKnown RBP eCLIP17.18■□□□□ 0.34
GARNL3-215ENST00000478702 ME1P48163 572 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 SOX4Q06945 474 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-215ENST00000478702 BECN1Q14457 450 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 SEZ6Q53EL9 994 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 ZC2HC1CQ53FD0 456 aaPredicted RBP17.18■□□□□ 0.34
GARNL3-215ENST00000478702 RESP18Q5W5W9 173 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 CEP57Q86XR8 500 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 DHX58Q96C10 678 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 ZMAT2Q96NC0 199 aaKnown RBP17.18■□□□□ 0.34
GARNL3-215ENST00000478702 GOLGA2P5Q9HBQ8 144 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 SLC38A7Q9NVC3 462 aa17.18■□□□□ 0.34
GARNL3-215ENST00000478702 NCOR2Q9Y618 2525 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 KANSL1LA0AUZ9 987 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 CXCL8P10145 99 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 HOXA9P31269 272 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 MLF2Q15773 248 aaPredicted RBP17.17■□□□□ 0.34
GARNL3-215ENST00000478702 KYAT1Q16773 422 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 PPM1LQ5SGD2 360 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 LIN9Q5TKA1 542 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 POTEHQ6S545 545 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 ZNF720Q7Z2F6 126 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 DGLUCYQ7Z3D6 616 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 RUBCNQ92622 972 aa17.17■□□□□ 0.34
GARNL3-215ENST00000478702 STRA6Q9BX79 667 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms