RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 STX10O60499 249 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 ZNF623O75123 536 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 TPM3P06753 285 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 TMEM191BP0C7N4 346 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 MLH1P40692 756 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 KCNJ6P48051 423 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 MXI1P50539 228 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 DLX2Q07687 328 aaPredicted RBP12.63□□□□□ -0.39
PDCD11-204ENST00000478543 BIRC3Q13489 604 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 IKBKEQ14164 716 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 NR1I3Q14994 352 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 TMEM132DQ14C87 1099 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.63□□□□□ -0.39
PDCD11-204ENST00000478543 AGMOQ6ZNB7 445 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 WDR49Q8IV35 697 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 KIF12Q96FN5 646 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 PCMTD1Q96MG8 357 aaPredicted RBP12.63□□□□□ -0.39
PDCD11-204ENST00000478543 ZFP42Q96MM3 310 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 RPS6KC1Q96S38 1066 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 ZBED2Q9BTP6 218 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 MTMR12Q9C0I1 747 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 TMEM117Q9H0C3 514 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 FAM86C1Q9NVL1 165 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 INPP5FQ9Y2H2 1132 aa12.63□□□□□ -0.39
PDCD11-204ENST00000478543 COL4A6Q14031 1691 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 N4BP1O75113 896 aaKnown RBP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 CLSTN1O94985 981 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 TNNC2P02585 160 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 FGFR1P11362 822 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 KLK7P49862 253 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 GUCY2FP51841 1108 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 FAM189BP81408 668 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 POU5F1Q01860 360 aaKnown RBP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ENPEPQ07075 957 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 SYCP1Q15431 976 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 TCEAL5Q5H9L2 206 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ZNF598Q86UK7 904 aaKnown RBP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ADHFE1Q8IWW8 467 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 CD302Q8IX05 232 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 HELQQ8TDG4 1101 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ANP32BQ92688 251 aaKnown RBP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 MRPL38Q96DV4 380 aaKnown RBP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ANKRD36BP1Q96IX9 119 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ZMAT2Q96NC0 199 aaKnown RBP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 GAD1Q99259 594 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 CRACR2AQ9BSW2 395 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 ASB7Q9H672 318 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 RSAD1Q9HA92 442 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 PLEKHA5Q9HAU0 1116 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 TMEM8AQ9HCN3 771 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.62□□□□□ -0.39
PDCD11-204ENST00000478543 CNTN3Q9P232 1028 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 LRFN2Q9ULH4 789 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 GIT1Q9Y2X7 761 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 PCDHB7Q9Y5E2 793 aa12.62□□□□□ -0.39
PDCD11-204ENST00000478543 PLXNA3P51805 1871 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 NLRC5Q86WI3 1866 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 CITO14578 2027 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 SMIM28A0A1B0GU29 152 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 ARL5CA6NH57 179 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 PTGESO14684 152 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 PHACTR2O75167 634 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 C4BPAP04003 597 aaKnown RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 GTF2H1P32780 548 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 PIK3CAP42336 1068 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 GATMP50440 423 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 SCNN1GP51170 649 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 AFF1P51825 1210 aaKnown RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 CLDN10P78369 228 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 DUOXA2Q1HG44 320 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 TDRD10Q5VZ19 366 aaKnown RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 KRT39Q6A163 491 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 ALKAL1Q6UXT8 129 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 GBP6Q6ZN66 633 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 SV2AQ7L0J3 742 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 TMC6Q7Z403 805 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 DRC7Q8IY82 874 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 FBXO22Q8NEZ5 403 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 TAS1R2Q8TE23 839 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 CACTINQ8WUQ7 758 aaKnown RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 C18orf25Q96B23 403 aaPredicted RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 ELMO3Q96BJ8 720 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 PABPC5Q96DU9 382 aaKnown RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 MRFAP1L1Q96HT8 127 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 LSM14BQ9BX40 385 aaKnown RBP12.61□□□□□ -0.39
PDCD11-204ENST00000478543 TMEM161AQ9NX61 479 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 MIOSQ9NXC5 875 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 GCNT4Q9P109 453 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 TUBGCP4Q9UGJ1 667 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 CACNA1AO00555 2505 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 DMXL1Q9Y485 3027 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 MICAL3Q7RTP6 2002 aa12.61□□□□□ -0.39
PDCD11-204ENST00000478543 ZFHX2Q9C0A1 2572 aaPredicted RBP12.6□□□□□ -0.39
PDCD11-204ENST00000478543 OFD1O75665 1012 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 UPP2O95045 317 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 VNN1O95497 513 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 EOMESO95936 686 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 POMCP01189 267 aa12.6□□□□□ -0.39
PDCD11-204ENST00000478543 HLA-DRAP01903 254 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms